Gene Ajs_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1539 
Symbol 
ID4672384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1595223 
End bp1596230 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content70% 
IMG OID639838626 
Producthypothetical protein 
Protein accessionYP_985808 
Protein GI121593912 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.709842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.219537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTCAA GTGACAGCAC GCTCACGCGG CCCTGGCCCG CGTATTTCCC GCGCATGCTC 
TCGCGCACTG TGGCTCTGCA GCCGCCGGCC GCGAGCGTCG CGGCTCTGAC ACCCGCTTCC
CGCGGCAATC CGTCGCACCA GCGCTGGAGC CGGTTGCCGC CGGCCGCGCG CAAGGTACTC
GCCGTCACCG CCCTGTCCCT CGGCCTGCAC GCCCACGCGC TGCAGGTCGT AGAGGCCAGC
GACGGGGTGG CGGTCGAGGC CATCGTCTCT CTCAAGGAAC CCACGCGCAT CCGCATCGAG
GGCGCGGCGA TCACCGACGT GTTCGGCAAC ATCCATTCCA GCCATTGCGG CGGCGGCGCA
CCGGCCATCT CTGCCGCACC CAACACCCCG TCAAGCACGC CCGGCCTTGC CAGCCCGGCA
TCGATCACCT CCTCCTCGGT CAACCCGGCC GGGGACGTCA TCGTCGAATG CGACCGCGAC
AAGGGCGAGG TCTACATCCG GCCCGCCGGC GATGCGCTGC GGCCAATCAA CCTGTTCGTT
TCGTCGGCCA CGGCCACCTA CACGCTGTTG CTGCGCCGTT CGGACACCCC GGCGGACACC
ATCGTGATCC GCGACAAGAC GCCCCAGGCG CTGCGCCCTG GTGGTCCCGA GGCCGCGCCC
TCCGGCCCGG CCCCCAGCCA TGTGCGCGCG ATGAAGGGCC TGCTGGTGGC CATGTCCTCG
AACCGCGTGC CTGCCGATGT GCGCGTCGAG GAGGCCTCCA AGCCCGTCCA GCTCTGGACG
GAGGCACGCT TCACGCTACT GCGCCGCTAC GAGGGGCGTG GCTATGTCGG CGAAAAGTAC
GCCCTGCAGA ACGTGAGCCT GGCTCCCATG GTGCTGGCCG AGCAGGAGTT CGACCGTCCG
GACAGCCGTG CCGGCGGAGA GATCACCGGC ATCGCGATCG AGCACCACAA CCTGCGGCCG
GGTGAGACCA CCAGCGTCTA CGTGATCCGG CGGGGAGGCA TGCGATGA
 
Protein sequence
MRSSDSTLTR PWPAYFPRML SRTVALQPPA ASVAALTPAS RGNPSHQRWS RLPPAARKVL 
AVTALSLGLH AHALQVVEAS DGVAVEAIVS LKEPTRIRIE GAAITDVFGN IHSSHCGGGA
PAISAAPNTP SSTPGLASPA SITSSSVNPA GDVIVECDRD KGEVYIRPAG DALRPINLFV
SSATATYTLL LRRSDTPADT IVIRDKTPQA LRPGGPEAAP SGPAPSHVRA MKGLLVAMSS
NRVPADVRVE EASKPVQLWT EARFTLLRRY EGRGYVGEKY ALQNVSLAPM VLAEQEFDRP
DSRAGGEITG IAIEHHNLRP GETTSVYVIR RGGMR