Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1539 |
Symbol | |
ID | 4672384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1595223 |
End bp | 1596230 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639838626 |
Product | hypothetical protein |
Protein accession | YP_985808 |
Protein GI | 121593912 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.709842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.219537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGTCAA GTGACAGCAC GCTCACGCGG CCCTGGCCCG CGTATTTCCC GCGCATGCTC TCGCGCACTG TGGCTCTGCA GCCGCCGGCC GCGAGCGTCG CGGCTCTGAC ACCCGCTTCC CGCGGCAATC CGTCGCACCA GCGCTGGAGC CGGTTGCCGC CGGCCGCGCG CAAGGTACTC GCCGTCACCG CCCTGTCCCT CGGCCTGCAC GCCCACGCGC TGCAGGTCGT AGAGGCCAGC GACGGGGTGG CGGTCGAGGC CATCGTCTCT CTCAAGGAAC CCACGCGCAT CCGCATCGAG GGCGCGGCGA TCACCGACGT GTTCGGCAAC ATCCATTCCA GCCATTGCGG CGGCGGCGCA CCGGCCATCT CTGCCGCACC CAACACCCCG TCAAGCACGC CCGGCCTTGC CAGCCCGGCA TCGATCACCT CCTCCTCGGT CAACCCGGCC GGGGACGTCA TCGTCGAATG CGACCGCGAC AAGGGCGAGG TCTACATCCG GCCCGCCGGC GATGCGCTGC GGCCAATCAA CCTGTTCGTT TCGTCGGCCA CGGCCACCTA CACGCTGTTG CTGCGCCGTT CGGACACCCC GGCGGACACC ATCGTGATCC GCGACAAGAC GCCCCAGGCG CTGCGCCCTG GTGGTCCCGA GGCCGCGCCC TCCGGCCCGG CCCCCAGCCA TGTGCGCGCG ATGAAGGGCC TGCTGGTGGC CATGTCCTCG AACCGCGTGC CTGCCGATGT GCGCGTCGAG GAGGCCTCCA AGCCCGTCCA GCTCTGGACG GAGGCACGCT TCACGCTACT GCGCCGCTAC GAGGGGCGTG GCTATGTCGG CGAAAAGTAC GCCCTGCAGA ACGTGAGCCT GGCTCCCATG GTGCTGGCCG AGCAGGAGTT CGACCGTCCG GACAGCCGTG CCGGCGGAGA GATCACCGGC ATCGCGATCG AGCACCACAA CCTGCGGCCG GGTGAGACCA CCAGCGTCTA CGTGATCCGG CGGGGAGGCA TGCGATGA
|
Protein sequence | MRSSDSTLTR PWPAYFPRML SRTVALQPPA ASVAALTPAS RGNPSHQRWS RLPPAARKVL AVTALSLGLH AHALQVVEAS DGVAVEAIVS LKEPTRIRIE GAAITDVFGN IHSSHCGGGA PAISAAPNTP SSTPGLASPA SITSSSVNPA GDVIVECDRD KGEVYIRPAG DALRPINLFV SSATATYTLL LRRSDTPADT IVIRDKTPQA LRPGGPEAAP SGPAPSHVRA MKGLLVAMSS NRVPADVRVE EASKPVQLWT EARFTLLRRY EGRGYVGEKY ALQNVSLAPM VLAEQEFDRP DSRAGGEITG IAIEHHNLRP GETTSVYVIR RGGMR
|
| |