| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1529 |
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| Symbol | |
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| ID | 4673953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1586023 |
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| End bp | 1586775 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639838616 |
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| Product | hypothetical protein |
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| Protein accession | YP_985798 |
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| Protein GI | 121593902 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02742] type-F conjugative transfer system pilin assembly protein TrbC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.905367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGCTA CTGACCGCTC CTACCTCCCC ATCCTCCTGC GGCGCGGGCT CATCTTCCTG
CTGGCCGCTG GCGCGATGCC AGCGGTCTGG GCCGCCGGCC CGGCCATCAC CGAGGCCGAC
ATCGAGCGCG CGCGCCGCGC CCAGCCCACG ATCACCGAGC AGGACATCGA ACAGGCGCGG
CGCAAGCACA GCCTGCCTCC GGTGGACATC CCGGCGACCA CCGGCCCCTC CATCGATGCC
CTGCCGCAGC CCGTGACGCG CACGCCGATC GACCTCGAAG CGCTGGCGCG CGGCTATGCG
TCGCAGACGG ACGCGATGGA GGCCGCACAG GGCCTGGCCA AGGGACCCGG TCTGTTCGTC
TTCGTCAGCC TCGCAATGCC CCGGCCCACG CTGCAGCGGC TGATCGACCA GGCTGCTCGC
GCCCGTGCCT CGGTCATCCT GCGCGGCCTA GCCAACGGCT CGCTGCGCCA GACCGTGGCC
CAGGTGCAGC CGCTGATCGG GCAGCGCCAG GTCGCGGTGC AGATCGACCC GCAGGCCTTC
GACCGCTTCG CGATCGCGCG GGTGCCCAGT TTCGTGCTGG TGCGCGACGG CACGCGGCCC
GAGTCCTGCG CCGCGGGCAG CTGTGCGCCG CCGGAGGCCT TCCTGCGCAC GGCCGGGGAC
GTGAGCATGG ACTATGCGCT CGAGCACATG CAGCGCGCCG CCCCAGCGTT TCGCGCCGAT
GCGGCTCCGT TCCTCGCGCG GTTGCGGAAC TAG
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| Protein sequence | MSATDRSYLP ILLRRGLIFL LAAGAMPAVW AAGPAITEAD IERARRAQPT ITEQDIEQAR
RKHSLPPVDI PATTGPSIDA LPQPVTRTPI DLEALARGYA SQTDAMEAAQ GLAKGPGLFV
FVSLAMPRPT LQRLIDQAAR ARASVILRGL ANGSLRQTVA QVQPLIGQRQ VAVQIDPQAF
DRFAIARVPS FVLVRDGTRP ESCAAGSCAP PEAFLRTAGD VSMDYALEHM QRAAPAFRAD
AAPFLARLRN
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