| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1525 |
|---|
| Symbol | |
|---|
| ID | 4673884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1580866 |
|---|
| End bp | 1582314 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639838612 |
|---|
| Product | TraH family protein |
|---|
| Protein accession | YP_985794 |
|---|
| Protein GI | 121593898 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.210964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.542634 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCC ATTCCCGCAC CGTTCATGCG CGCAAGGCCA CTGCTGCGGC CGTCGCCCTG
TCGCTTCTGT GCACCACGAT GCCCAGTCGC GCTGATCTCA ACAGCGAGGT CAACGACATG
TTCAATAACC TGGGCGCCAT CGGCAACTAC ACGGCGCCCG GGGCGTTCCG GGGCCAGACC
TACAACACCT ACACCGGCGG CTCACTCATG ATGCGCTCGC CGAACAAGGT GTATCAATTG
GCGGCCATCC AGTTTCCGAG CGCGAAAGCA GGCTGCGGCG GGATCGACGT GTTCGGTGGC
AGCTTCAGCC ACATCTCCGC GCAGGAGTTC AAGAACATGC TGCGCAACAT CACGGCGGCC
CTGCCGGGCA TCGCTTTCCA ACTGGCGCTG GAAGCGGTCT CCCCCCTGCT CGGTGGACTC
ACCAAATGGG CCAAGGGCCT GGAGACATGG ATCAACAACG CCCGCATCAA TTCCTGCGAA
ACGGCGAAAG CCATCGTCAG TACGGCAGCC GAAGCCGTGG GCTACAGCGC GCAGGAGACC
TGCGCCGATC TCGCGATCGA CATGGGTCTG GAGAGCGACC GGGACGCGGC GCGCAAACGC
TGTGGCACCG ACCGGCCCAG CATCCTGTCG TCGGCGCGGT CGTCGGGAGA TGCCAATGTG
CGCAACAAGG CCCCTTTCGT CGGCAACCTG ACCTGGAAAG CTCTGCAGTA CACCGGCGCC
TATCTAGATG ATGCCGAACG CGAGCTGATT ATGAGCATGG TCGGTACCAT CATCTACTAC
CCCGAGGAAT CGAAGCGCGA TCCGGAACCC ATCGCGCCGA CGCTCACCTC CATCAGCCAA
CTGCTCTACG GCCAGGCTGC GGGCTCCGGC ACCGACGTCG TCCAGCACCT GCGGCGCTGC
AACGACTACA CGAACTGCGA TGTGGTCTCG CTCAATACCA ACTACAGCCA CGTCCCATTC
ACGGCGAAGG TCGAAACGAT GATGCGCTCG ATCTCTGACA AGATTGCCAC GCGCACGCCG
ATTCCCAACA ACTCGGCGGA AGTGGGCTTC GTGAACCAGA CCACCGAACC CGTCTACAAG
ATGCTCTCGG TGGGCACCAG CATCCCGGGT TCGGGCCTGG CCGACAGCCT GATCGGCCAG
TACCGCGACG TGATCGCCGC GGACTATGCC TACGTCTTCC TCGAACGCAA TCTGCGCCTG
GGCATGGCAG CTCTGTCCAA GGACTACACC TTGCAGCAGA CCCAGCGCGA CCAGGCCAAC
CAGGTGCGCC AGCGTGCGCA GGCCATGCTG TTGCAGATCT CGCAGGAGAA GAACCTGCTG
TACCAGAAGG TCGGCTCGTT CCGGGCCGTG GCAAGCCACC TGGAAGAGCT CGAGCGGCAA
TTGCGCACCA GCATGCCCCA GCACGTCATG GACATGCTGG GCCAGCAGGC GGCCTACCTG
TCGCGCTGA
|
|---|
| Protein sequence | MPIHSRTVHA RKATAAAVAL SLLCTTMPSR ADLNSEVNDM FNNLGAIGNY TAPGAFRGQT
YNTYTGGSLM MRSPNKVYQL AAIQFPSAKA GCGGIDVFGG SFSHISAQEF KNMLRNITAA
LPGIAFQLAL EAVSPLLGGL TKWAKGLETW INNARINSCE TAKAIVSTAA EAVGYSAQET
CADLAIDMGL ESDRDAARKR CGTDRPSILS SARSSGDANV RNKAPFVGNL TWKALQYTGA
YLDDAERELI MSMVGTIIYY PEESKRDPEP IAPTLTSISQ LLYGQAAGSG TDVVQHLRRC
NDYTNCDVVS LNTNYSHVPF TAKVETMMRS ISDKIATRTP IPNNSAEVGF VNQTTEPVYK
MLSVGTSIPG SGLADSLIGQ YRDVIAADYA YVFLERNLRL GMAALSKDYT LQQTQRDQAN
QVRQRAQAML LQISQEKNLL YQKVGSFRAV ASHLEELERQ LRTSMPQHVM DMLGQQAAYL
SR
|
|---|
| |