| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1514 |
|---|
| Symbol | |
|---|
| ID | 4672187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1570022 |
|---|
| End bp | 1570867 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639838607 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_985789 |
|---|
| Protein GI | 121593893 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.744458 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA CCAAGAAGAG CAAGGCAACT CGTACTGACG ACGCCCAACC CCGTCGGCAC
GAGGGCGATG CCGCCGTTGC CCAGGCACTC GACCGGGAGG GGTACGAGGC CCAGTTGCGT
CTGCTGCAAA TCGAACTCGT GAAGCTCCAG CGTCACTTCA TCAAGTGCCG CGACCGGATT
CTCATTCTCC TCGAAGGCCG TGACACAGCG GGCAAGGATG GCAGCATCAA GCGCATCGTC
GAGAACCTCA GTCCACGCGA GACCCGCGTT GTGGCACTGG GCAAACCGTC CGACCGCGAG
CGCAGTGCCT GGTACTTTCA GCGCTACGTG CCGCACCTGC CGGTGGCTGA GGAACTCGTT
CTGTTCAACC GCAGTTGGTA CAACCGCGCG GGTGTCGAGC ACGTGATGGG TTTCTGTACG
CTGGACGAGC ACGAGGAATT CATGCAGTCG GTCCCCAGCT TCGAGGCGAT GCTCGTCGGC
TCGGGCATCA AGCTACTCAA GTATTACCTG GACATCGGCA AGGACGAACA GATCAAGCGC
CTGCACGATC GGCGTCACGA TCCGCTGAAA CAGTGGAAAT CGAGCCCGAT CGACGCCGTC
GCCGTGAAGC ACTGGAGGGC CTACTCGCAG GCGCGGGACG AGATGCTGAT GCGTACGCAC
AACGCGGCGG CCCCATGGCA CGTCGTGCGT GCCGACGACA AGCGACTTGC ACGGCTCAAC
CTGATGCGAG ACATCCTGTC GCGACTGCAC TACGCGGACA AGAAGGACAA GCTTGTGCGT
CCCGATCCCG GTGTCGTGTT CGAGTTCTCG CCGGAATGCC TCAAGGCAGG TCGCCTGGCC
CCTTGA
|
|---|
| Protein sequence | MKKTKKSKAT RTDDAQPRRH EGDAAVAQAL DREGYEAQLR LLQIELVKLQ RHFIKCRDRI
LILLEGRDTA GKDGSIKRIV ENLSPRETRV VALGKPSDRE RSAWYFQRYV PHLPVAEELV
LFNRSWYNRA GVEHVMGFCT LDEHEEFMQS VPSFEAMLVG SGIKLLKYYL DIGKDEQIKR
LHDRRHDPLK QWKSSPIDAV AVKHWRAYSQ ARDEMLMRTH NAAAPWHVVR ADDKRLARLN
LMRDILSRLH YADKKDKLVR PDPGVVFEFS PECLKAGRLA P
|
|---|
| |