| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1511 |
|---|
| Symbol | |
|---|
| ID | 4672047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1565555 |
|---|
| End bp | 1566169 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639838604 |
|---|
| Product | LemA family protein |
|---|
| Protein accession | YP_985786 |
|---|
| Protein GI | 121593890 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1704] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.69896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAAC TGCTTCTTGC CGTACTCGCC ACCCTGACGC TTGCGTTGTC GGGTTGCGGC
TACAACACCT TCCAGTCGAC CGACGAACAG ATCAAGGCGA GCTGGTCGGA GGTGCTCAAC
CAGTACCAGC GTCGCGCGGA CCTGATCCCG AACGTCGTCG CCACCGTCAA GGGCGAGGCG
AACTTCGAGC AGGAGACGCT GACCAAGGTT GTCGAGGCGC GCGCCAAGGC CACCTCGATC
CAGGCCACAC CCGAACTGGT CAACAACCCC GAGGCCTTCA ACAAGTTCCA AGCGGCCCAG
GGCGAGCTGT CGAGCGCGCT GTCGCGCCTG CTGGTGGTCA GCGAGAATTA CCCGAGCCTG
AAGGCCAACC AGGGCTTCCA GGACCTGCGC GCGCAATTGG ACGGCACAGA GAACCGCATC
GCCGTCGCGC GTGGCCGCTA CGTCAAGGCG GTGCAGGACT ACAACGTGAC GGTCCGCAGC
TTCCCGAGCA ACCTGACCGC GATGGTGTTC GGCTACGGAG TCAAGGCGAA CTTCAGCGTC
GCTGACGAGA AGGCCCTGGC CGTGCCGCCC AAAGTCGATT TCGGCGCTTC AGGCGCCGGG
GGGGGGTCGA AGTGA
|
|---|
| Protein sequence | MRKLLLAVLA TLTLALSGCG YNTFQSTDEQ IKASWSEVLN QYQRRADLIP NVVATVKGEA
NFEQETLTKV VEARAKATSI QATPELVNNP EAFNKFQAAQ GELSSALSRL LVVSENYPSL
KANQGFQDLR AQLDGTENRI AVARGRYVKA VQDYNVTVRS FPSNLTAMVF GYGVKANFSV
ADEKALAVPP KVDFGASGAG GGSK
|
|---|
| |