| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1507 |
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| Symbol | |
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| ID | 4671546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1561264 |
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| End bp | 1562799 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639838600 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_985782 |
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| Protein GI | 121593886 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACC ACGCCATGAA CGAGCAGCGC GACCATGACA CCAGGCTGCG CGCCTGGCGC
ACCGGCATCG ACACCTACCA GGAGCCCATC GTCTATATGC GCAGTGACTG CGTGGTCTGC
CGTTCCGAGG GCTTCACGAC GCAGACGCGC GTGCTGCTTA CCGCCGGCAC CCGCAGCGCC
GTGGCCACGC TGAATGTGGT CGAGGGAAAT TGGCTGGCCC CTGGCGTCGC GGGCCTGTCC
GAGGCGGCCT GGCACGCGCT CGATCCTGCC GCCGACGCCT GGATCAACGT CAGCTACGCA
CCGACGCTCG ATTCGCTGAG CCACGTGCGC GCCAAGGTCT ATGGCCACCG CCTTGATGCC
GGCGCATTCA ATGCCGTGAT CGGCGACGTC GCGGCAGGCC GCTACTCCGA CCTGTACCTG
GCCGCATTCG TCACCGCATG CGCCGGCGAC CGGCTCGACC TGTCCGAGAC CGTGGCGCTA
ACCCGGGCCA TGGTCGCCGT CGGCCACCGG CTCGACTGGG GCCGCGAAAC CGTGGTTGAC
AAGCACTGCG TCGGTGGGCT GCCAGGCAAC CGCACCACCT TGCTGGTCGT GCCCATTGTC
GCGGCCTGCG GGCTGACCAT GCCCAAGACA TCCTCGCGCG CGATCACTTC GCCGGCCGGC
ACCGCAGACA CGATGGAGGT GCTGGCGCCG GTGAACCTGG ACATCGCCGC GATGCGGCGC
ACCGTTGAGC GCACCGGTGG CTGCATCGTG TGGGGTGGCT CGGTGCGGCT GAGTCCGGCC
GACGATGTGC TGATCCGCGT CGAGCGGCCG CTGGACCTCG ACAGCGAGGG CCAGTTGGTC
GCCTCCGTTC TGTCAAAGAA AGCCGCAGCC GGCTCCACCC ATGTGCTGAT CGACCTGCCG
GTAGGCCCGA CCGCCAAGGT GCGCAGCACC GAGGCCGCAC AGTCGCTCGG CCGCCGCCTG
GTGGAAGTCG GCCGCGCGAT CGGCCTGCAG GTCACTCTGC GCATCACCGA CGGGTTGCAG
CCCGTCGGCC GGGGTGTCGG CCCGGCACTG GAAGCACGCG ACGTACTGGC GGTGCTGCGC
GGCCAGGCCG ATGCCCCCGA TGATCTGCGC CAGCGGGCCC TGCGACTGGC TGGCGACATC
CTAGAGCTGG GCGGCGCTGC GCCCAACGGA AGCGGCCTGC AGCTGGCCGC CGAGGTGCTG
GCCGACGGCC GCGCCTGGGC CAAGTTCCAG GCCATCTGCG AGGCGCAGGG AGGGCTGCGC
GAGGTGCCCG TGACGCCGTA TCGGCAGGTC ATCACGGCAG CGGTGGCCGG GCGGGTTGCG
GCCATTGACA ACCGCGTGCT CGCGCGCGCG GCCAAATTGG CTGGAGCGCC AAAGGCGCCA
GCCGCCGGGG TCGATGTGCA CGCACGCATC GGCGATCCGG TCCAGGCCGG CCAACCGCTG
TTCACGCTGC ATGCCCAGAC GGCCGGCGAG CTGGACTACG CCGGGCACTT CGTGGACACC
CGTCCGCCCA TCTTCCAGAT CTCGGAGGAA GCATGA
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| Protein sequence | MSDHAMNEQR DHDTRLRAWR TGIDTYQEPI VYMRSDCVVC RSEGFTTQTR VLLTAGTRSA
VATLNVVEGN WLAPGVAGLS EAAWHALDPA ADAWINVSYA PTLDSLSHVR AKVYGHRLDA
GAFNAVIGDV AAGRYSDLYL AAFVTACAGD RLDLSETVAL TRAMVAVGHR LDWGRETVVD
KHCVGGLPGN RTTLLVVPIV AACGLTMPKT SSRAITSPAG TADTMEVLAP VNLDIAAMRR
TVERTGGCIV WGGSVRLSPA DDVLIRVERP LDLDSEGQLV ASVLSKKAAA GSTHVLIDLP
VGPTAKVRST EAAQSLGRRL VEVGRAIGLQ VTLRITDGLQ PVGRGVGPAL EARDVLAVLR
GQADAPDDLR QRALRLAGDI LELGGAAPNG SGLQLAAEVL ADGRAWAKFQ AICEAQGGLR
EVPVTPYRQV ITAAVAGRVA AIDNRVLARA AKLAGAPKAP AAGVDVHARI GDPVQAGQPL
FTLHAQTAGE LDYAGHFVDT RPPIFQISEE A
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