| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1495 |
|---|
| Symbol | |
|---|
| ID | 4674107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1549187 |
|---|
| End bp | 1551094 |
|---|
| Gene Length | 1908 bp |
|---|
| Protein Length | 635 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639838593 |
|---|
| Product | FtsH-2 peptidase |
|---|
| Protein accession | YP_985775 |
|---|
| Protein GI | 121593879 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.421707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATGG ACAAGAAGCA GACCTTTTCG CTTTGGTACG TGTTGGCCGC ACTGATCGGA
CTGATGCTGG TGCAGGAGTT TGCGCAGACA CGACACACGC AGACTTTGAG CTACAGCGAA
TTCAAACAGG CATTGCTAGC CGGCAAGCTC GAGGATGTGG TGATCGCAGA GGGCATGGCC
ACCGGCAAGC TGCGCGCAGA TGGCCTGGAT CAGATTCTTC CCAAGGAGAA AATTGAAGAG
CTGAAGAAGG CCAGTGGCGA GCATGGGTTC ACAACAGTGC TGGTCGATGA CCCGAACCTT
GTCGCACAGC TCGACGCAGC CAAGGTACGC TACGGATCGG TGCGCCAGAG CAAGTGGCTG
GGCGCGCTGA TTTCATGGAT CGCACCGGCA TTGATATTCT TCGGCATCTG GTGGTTGTTG
ATGAAGCGCA TGGGTGGCGG CATGGGCCAC GGCGGTATGC TGGAAATCGG CAAGAGCAAG
GCCAAGGTTT ACATGCAGAC CGAAACCGGC GTGACCTTCA AGGACGTCGC CGGCATCGAC
GAAGCGCGCG AGGAACTGAT GGAGGTGGTC GAGTTCCTGA AGAACCCCGA TAGATACAAG
CGGTTGGGCG GAAAGATTCC CAAAGGGGTG CTGATCGTCG GTGCACCCGG AACCGGCAAG
ACGCTGCTGG CCAAGGCCGT GGCGGGCGAG GCGGGCGTGC CGTTCCTGTC CCTCAGCGGA
TCCGAGTTCG TCGAAATGTT CGTGGGCGTC GGCGCCGCGC GCGTGCGTGA CCTGTTCGAG
CAGGCGGCCG CCAAGGCGCC CTGCATCGTC TTCATCGACG AACTCGACGC GCTGGGCAAG
GCGCGCGGTG CCGGTCTGAC CGGCGGGCAT GAGGAACACG AGCAGACACT GAACCAGCTG
CTTGTCGAGA TGGATGGCTT CGACACCAAC CGCGGCGTAA TCATCATGGC GGCGACGAAC
CGGCCCGAGA TCCTCGACCC GGCGTTGTTG CGTCCAGGAC GTTTCGACCG CCATGTGGCG
ATCGACCGCC CTGACCTGAA TGGGCGGCGG CAGATTCTCG AGGTGCACGT CAAGCACGTG
ACGCTAGGGC CGGACGTGGA CCTTGCCGCG CTCGCCGCCC GCACGCCGGG CTTTGCCGGC
GCCGACCTCG CCAACCTGGT CAATGAGGCG ACGTTGCGCG CTGCCAAGCG CGACAAGCCG
GCGGTCGAGA TGAAGGACTT CGATGAGGCG CTCGACCGCA TTGTCGCCGG GCTGGAGAAG
AAGAACCGCG TGATGAACCC GATGGAGCGC AAGTTCGTCG CCTTCCACGA AGCAGGCCAT
GCGGTGGTTG CCGAGATGCG CCGAAATACC GACCGGGTGT CGAAGGTGTC CATCATCCCG
CGCGGCATCG CCGCCCTCGG CTACACGCAG CAGTCGCCCA CCGAGGACCG CTACCTGATG
CGCAAAAGCG AACTGCTCGA CCGCATCGAC GTGCTGCTGG GCGGGCGCGT GGCCGAGAAG
CTGGTCTTCG ACGACGTGTC GACAGGTGCC GAGAACGATC TGCAGCGGGC CACCGACATG
GCGCGCCACA TGGTGACCCA CTATGGCATG AGTGATACGC TGGGCCTGGC GACCTTCGAC
TCGCGCCCTA CGCCGCTGTT TCTCAGTGGG CCGGTGCTGC CGGGGCCGCG CGAGTTCAGC
GAGCGCACGG CCGAGGCGAT CGACGTCGAG GTGCGGCGCA TCCTCGATGA GTCGCGTGAG
CGGGTCACGC AGACGCTCAC GACGCACAGA GCGTCGCTTG ATGCGTTGGC GCGGCTGTTG
CTCGAGAAGG AGGTCGTCGA TCGCGCGATG CTGGACGAGG TCATGGCAGG CGCCACCACG
ACGCCGGATC AGTTGCAGAC TGCGGCCTTG CCGCTGCAGT CGTCGTGA
|
|---|
| Protein sequence | MAMDKKQTFS LWYVLAALIG LMLVQEFAQT RHTQTLSYSE FKQALLAGKL EDVVIAEGMA
TGKLRADGLD QILPKEKIEE LKKASGEHGF TTVLVDDPNL VAQLDAAKVR YGSVRQSKWL
GALISWIAPA LIFFGIWWLL MKRMGGGMGH GGMLEIGKSK AKVYMQTETG VTFKDVAGID
EAREELMEVV EFLKNPDRYK RLGGKIPKGV LIVGAPGTGK TLLAKAVAGE AGVPFLSLSG
SEFVEMFVGV GAARVRDLFE QAAAKAPCIV FIDELDALGK ARGAGLTGGH EEHEQTLNQL
LVEMDGFDTN RGVIIMAATN RPEILDPALL RPGRFDRHVA IDRPDLNGRR QILEVHVKHV
TLGPDVDLAA LAARTPGFAG ADLANLVNEA TLRAAKRDKP AVEMKDFDEA LDRIVAGLEK
KNRVMNPMER KFVAFHEAGH AVVAEMRRNT DRVSKVSIIP RGIAALGYTQ QSPTEDRYLM
RKSELLDRID VLLGGRVAEK LVFDDVSTGA ENDLQRATDM ARHMVTHYGM SDTLGLATFD
SRPTPLFLSG PVLPGPREFS ERTAEAIDVE VRRILDESRE RVTQTLTTHR ASLDALARLL
LEKEVVDRAM LDEVMAGATT TPDQLQTAAL PLQSS
|
|---|
| |