| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1482 |
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| Symbol | |
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| ID | 4670918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1536187 |
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| End bp | 1537800 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639838583 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_985765 |
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| Protein GI | 121593869 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0845] Membrane-fusion protein
[COG5569] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0952522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAG GTTTCAAGGC CGGCGTATTC CTGGCTATCG TCGCCGCAGG GTTGGCGGCG
GGTGGTGGCT ATTGGATGGG ACAGCGCCAA TCAGAAGCCC GCAGTGGTGA CCAGACTGCG
TCGCAGGGCG CCTCTGCCGG TCCTACCAAG AAGGAGCGCA AGGTACTTTT TTACCGTAAC
CCGATGGGGC TGCCCGACAC ATCTCCCACA CCGAAAAAAG ATCCAATGGG GATGGACTAC
ATCGCGGTCT ACGAGGGCGA GCAGGAAGAA GCAGAAACCA ACTCCAATCA AATTCGCATC
AGCACCGAAA AGATTCAGAA ACTCGGCGTT CGCACCGAGG CGGTGAGTCT GCGCTCTCTG
GACAAGGTGG TGCGTGCCGC CGGACGCATC GAACCAGACG AGCGCCAGAC CTTCACCATC
GCTGCCAAAT TCGAGGGCTA TGTTGAGCGT CTGCATGCCA ACGTCACCGG ACAGGCGGTG
AGCAAGGGGC AGCCTCTCTT CGAGGTCTAT AGCCCCGAAC TGGTGTCTGC CCAGCGCGAG
TACGCCATCG CGGCACAGGG TGTCGATGCG TTGAAGGATG CCTCTGGTGA GACACAGCGT
GACATGCGTG AGCTGGCCGA CTCCAGCCTG GCGCGGCTTC GCAATTGGGA TATCTCGGAC
GAGCAGGTCA AGACCTTGGC CAAATCCGGC GACGCACGCC GCACGCTGAC ATTTCGCTCA
CCAGTGGCAG GGATCATCAC CGACAAGAAG GCCATCCAAG GTATGCGATT CATGCCGGGC
GAAATGCTCT ACCAAGTCGC CAACCTGTCC TCGGTCTGGG TCATCGCCGA TGTCTTCGAG
CAAGACATCG GCTTGGTCAA GTCGGGGGGC AAGGCCAAGG TGCAAATCAA TGCCTACCCA
GACAAGGTGT TCCAGGGGAC GGTTAGCTAT GTGTATCCCA CCCTGAAGCC TGAAACCCGA
ACGGTGCAGG TGCGCGTGGA CTTGTCAAAC ACGGGTGGCT TGCTCAAGCC TGGCATGTTT
GCCCAGGTGG AACTTCCGAC CGCCAGCAAG GGGGCGGTTT TGACGGTGCC GACTTCGGCC
GTGATTGACA GCGGCACGCG CCAGATCGTC CTGGTGCAGC TCAAGGAGGG ACGATTCGAA
CCCCGCGATG TCAAAGTGGG CGCACGCAGC GACGACCGCA TTGAAGTCAC CGAGGGCGTT
CGCGAGGGTG AGCAGGTGGT CATCGCTGCC AATTTCCTGA TCGATGCAGA AGCCAACCTC
AAGGCGGCCG TGGGCGGCTT TGGGCACTCC TCACATGGAG CTAAGTCGGA AGCACAAGGC
ACCCCTGATG CGAGCAAGCC CGCTGCCTCC GTCGGGCACC AAGGTGAGGG CAGGGTGGAG
GAGTCTGATG CGAAGGCCGG CACGGTGACC ATTGCCCATG GTCCCATACC CTCCCTCAAA
TGGCCTGCAA TGTCCATGGA GTTCAAGGTC TCCAACAATG GGCTGATGGC GGGCTTGCAA
CCTGGCGCAG CGGTGGTCTT CGAGTTCGTT GAGCGTGGAC AGGGTGAATG GGTGGTCACC
TCCGTGAAAC CCATGGGCAA AGCGGCGGCC ACTCCGCACG CCGACCATAA CTGA
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| Protein sequence | MTTGFKAGVF LAIVAAGLAA GGGYWMGQRQ SEARSGDQTA SQGASAGPTK KERKVLFYRN
PMGLPDTSPT PKKDPMGMDY IAVYEGEQEE AETNSNQIRI STEKIQKLGV RTEAVSLRSL
DKVVRAAGRI EPDERQTFTI AAKFEGYVER LHANVTGQAV SKGQPLFEVY SPELVSAQRE
YAIAAQGVDA LKDASGETQR DMRELADSSL ARLRNWDISD EQVKTLAKSG DARRTLTFRS
PVAGIITDKK AIQGMRFMPG EMLYQVANLS SVWVIADVFE QDIGLVKSGG KAKVQINAYP
DKVFQGTVSY VYPTLKPETR TVQVRVDLSN TGGLLKPGMF AQVELPTASK GAVLTVPTSA
VIDSGTRQIV LVQLKEGRFE PRDVKVGARS DDRIEVTEGV REGEQVVIAA NFLIDAEANL
KAAVGGFGHS SHGAKSEAQG TPDASKPAAS VGHQGEGRVE ESDAKAGTVT IAHGPIPSLK
WPAMSMEFKV SNNGLMAGLQ PGAAVVFEFV ERGQGEWVVT SVKPMGKAAA TPHADHN
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