| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1481 |
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| Symbol | |
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| ID | 4670923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1534916 |
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| End bp | 1536190 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639838582 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_985764 |
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| Protein GI | 121593868 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.103233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCTA TGAGGAATCG TCTGTCGTTG GGGGTAGTCG TGGTGTCTCT GGCGCTGAGC
TCGATGGTTC ACGCGCAGGA GGCCAAGCTG GGATCGAGTG TCGAAGGGTT GCTGCAAGCG
GCCAGGGATA GAAACCCAGA AATCGCCAGC ATGCGTTTTG ATGCGGATGC GGCAGCAGAG
CGCGTCGCGC CTGCGGGCGC CTTGCCGGAT CCGAAAATTC GAACCGAATT GCGTGACATC
ACGCGCATGG GAGAACAAAA CCCCACGCTA TTGCCAGGGC GCGTCGGAAG CACCCGCTAC
GTGCTGATGC AGGATTTTCC CTGGATGGGC AAACGCGGTC TGAAGCGTGA GGTGGCTGAG
TCACAAGCAC AAGCTGCGAG AAGCCGTGCA GCAGGCGCCT GGGTTGAACT GGCTGCCAAG
ATCAAGACGA CTTATGCCGA GCTCTATTAT CTGGACCAGA ACGAACGCTT GTCGCGGGAA
ATTCTCGACC TGATGGCGCG ATTGGAAAAA GTCGCGCAGG TCCGCTATGC GGGCGGGCTT
GCTGCGCAAC AGGATGTGAT CCGTGCGCAG GTGGAGCAGT CCACCATGCG CAACGAACTG
ATTGCACTGG ACGCTGAGCG TCGCCAACTC CAGTCCAAGT TGAATGCGCT CGTGGGGCGT
CCGACCTCGG AGATTTTGGC TGCACCCGAG CAGATCCGCG CCTTGCCGTC GCCGGAGCAA
GTCAGCTTCG CAGCGCTGGA AGGGCGCGCC CGGATGAACA ATCCGCTGCT GCGCACGGAA
GAGTCCCAGA TCAGGGCGGC CGAGAAGAAC CGCGAGCTGA CCTACAAGAA CCGCTATCCC
GACTTCAACG TCGGTATCTC TCCGATTCAG TACCGAGGCT CGATCAAAGA GTGGGAGCTG
ATGGTCGAGT TGAATATTCC CCTGCAGCAA GACTCGCGGC GCGCCCAGGA GCGGGAGTCC
GAGGCCATGT TGGCCGCTGC ACGCTCACGC CAGGAAGTCG TCACGAATCA AGTCCTGGCA
GACCTTTACG CCAACGTGGC AGGTTTTGAG TCCGCCCGGC GCTCTCTGGC GTTAACGACC
GAAAGTCTCT TGCCGCAGTC GGAGTTGACC TTCCGCTCTG CGCTGGCTGG GTACCAGACG
GGCAAGGTGG ATTTTGCGAC CTTGCTGGAC GCGCAGCGCC AGATTCGTCA GTCCAAACTG
AATCAGATCA AAGCCGGCGT GGAAGCGCAG AAGCGGCTTA CCGAAATTGA ACGCATCGTG
GGAGAAGAAC AATGA
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| Protein sequence | MMPMRNRLSL GVVVVSLALS SMVHAQEAKL GSSVEGLLQA ARDRNPEIAS MRFDADAAAE
RVAPAGALPD PKIRTELRDI TRMGEQNPTL LPGRVGSTRY VLMQDFPWMG KRGLKREVAE
SQAQAARSRA AGAWVELAAK IKTTYAELYY LDQNERLSRE ILDLMARLEK VAQVRYAGGL
AAQQDVIRAQ VEQSTMRNEL IALDAERRQL QSKLNALVGR PTSEILAAPE QIRALPSPEQ
VSFAALEGRA RMNNPLLRTE ESQIRAAEKN RELTYKNRYP DFNVGISPIQ YRGSIKEWEL
MVELNIPLQQ DSRRAQERES EAMLAAARSR QEVVTNQVLA DLYANVAGFE SARRSLALTT
ESLLPQSELT FRSALAGYQT GKVDFATLLD AQRQIRQSKL NQIKAGVEAQ KRLTEIERIV
GEEQ
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