Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1479 |
Symbol | |
ID | 4670961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1533369 |
End bp | 1534613 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639838580 |
Product | membrane protein-like protein |
Protein accession | YP_985762 |
Protein GI | 121593866 |
COG category | [S] Function unknown |
COG ID | [COG3174] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0309813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTTGCCG CGCTTGCTGT CGGTCTGGTG ATTGGCCTGG AGCGCGGCTG GCACGACCGC GAATTGCCGG AGGGTGGACG TGTCGCAGGC CTGCGCACCT TTGCGCTGAC CGGACTGCTC GGTGGCGTGC TTGGGCATTT GCAGCCAGAG TTCGGCGCGT GGCCTTTGCT GGGTGCGCTG CTCGGACTCG CCCTGCTGCT GACGGTGTCC TACGCCCGTA ACGCCAAACT GTCGGGCAAC CTGAGTGCCA CTACCCCGGT GGCAATGCTG CTCACTATGG TCCTAGGTGC CTTTGCGGCA CACGGCAACA TCACCTTGGC GTTGTCGGCA GCAGTGGTTG GCGCTGTGTT GCTGGACCTC AAGCCGACCT TGCACGGTTG GTTGCGTTTG ATCGATCACC GCGAATTGAC TGCATCGCTG CAACTGCTGG TGTTGTCCAT GGTCATCCTG CCTTATCTGC CCAATACGGG CCTCGGGCCC TATGCCGCGC TCAATCCGTA CCAGCTGTGG TGGGCAGTCA TCCTGATTGC GGGCCTGTCG TTGACGGGTC ACTTTGCCAT GCGGATCACC GGCGCGCAAA GGGGTGTGCT GTGGACCGGT ATCCTGGGAG GACTGGCATC TTCCACCGCA ACCACGTTGG CTTTGGCTCG CTACGCACGC GAGCAGCCTT CGCTGACAGG CGCGGCGGTA GCCGGCACGT TGGCATCCTG TGGCGTCATG TTTTTTCGCA TGGTCGTTCT GCTGGGTGTC ATCCAGCCGG CGCTGCTGTC CACCTTCGGC AGCGCCCTGG TGGTCACTGG CGTGGCACTG CTGTGTATTG CGCTATGGGG GTGGCGCAAG TTGGACCGCA CTGTAGTGGG GGAGGGCGCT GTCGGCGCGA TGGCGCCATT CGACCTTGGC ACCGCGCTCG GTTTTGGTGT GCTGCTCGCT GTCATGAGCG TCCTGGTGCC CGCGGCAAAG CAGTGGCTGG ACACCAGCGG CCTCTATGTG CTGTCGGCGG TTTCAGGCCT TGCCGACGTG GATGCGATCT TGATCTCGGT CGCTCGGCTG CATGGTGCCG GTGGATTGTC CACGGGCGCC ACCGTCACGG CGCTCGGTCT CGCGACATTG GCAAACATGG TGGCAAAGGT CGGCATCGCC TGGACGACAG GCGGCGCGCA GGTCGGTAAA TCGGTTGTTT TCGGCTACCT GGGTGCGATG GCGTCCGGAG CTGCCGTATT GGCGCTGAGC GTGACGTTTT CGTGA
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Protein sequence | MVAALAVGLV IGLERGWHDR ELPEGGRVAG LRTFALTGLL GGVLGHLQPE FGAWPLLGAL LGLALLLTVS YARNAKLSGN LSATTPVAML LTMVLGAFAA HGNITLALSA AVVGAVLLDL KPTLHGWLRL IDHRELTASL QLLVLSMVIL PYLPNTGLGP YAALNPYQLW WAVILIAGLS LTGHFAMRIT GAQRGVLWTG ILGGLASSTA TTLALARYAR EQPSLTGAAV AGTLASCGVM FFRMVVLLGV IQPALLSTFG SALVVTGVAL LCIALWGWRK LDRTVVGEGA VGAMAPFDLG TALGFGVLLA VMSVLVPAAK QWLDTSGLYV LSAVSGLADV DAILISVARL HGAGGLSTGA TVTALGLATL ANMVAKVGIA WTTGGAQVGK SVVFGYLGAM ASGAAVLALS VTFS
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