Gene Ajs_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1479 
Symbol 
ID4670961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1533369 
End bp1534613 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content64% 
IMG OID639838580 
Productmembrane protein-like protein 
Protein accessionYP_985762 
Protein GI121593866 
COG category[S] Function unknown 
COG ID[COG3174] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0309813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTGCCG CGCTTGCTGT CGGTCTGGTG ATTGGCCTGG AGCGCGGCTG GCACGACCGC 
GAATTGCCGG AGGGTGGACG TGTCGCAGGC CTGCGCACCT TTGCGCTGAC CGGACTGCTC
GGTGGCGTGC TTGGGCATTT GCAGCCAGAG TTCGGCGCGT GGCCTTTGCT GGGTGCGCTG
CTCGGACTCG CCCTGCTGCT GACGGTGTCC TACGCCCGTA ACGCCAAACT GTCGGGCAAC
CTGAGTGCCA CTACCCCGGT GGCAATGCTG CTCACTATGG TCCTAGGTGC CTTTGCGGCA
CACGGCAACA TCACCTTGGC GTTGTCGGCA GCAGTGGTTG GCGCTGTGTT GCTGGACCTC
AAGCCGACCT TGCACGGTTG GTTGCGTTTG ATCGATCACC GCGAATTGAC TGCATCGCTG
CAACTGCTGG TGTTGTCCAT GGTCATCCTG CCTTATCTGC CCAATACGGG CCTCGGGCCC
TATGCCGCGC TCAATCCGTA CCAGCTGTGG TGGGCAGTCA TCCTGATTGC GGGCCTGTCG
TTGACGGGTC ACTTTGCCAT GCGGATCACC GGCGCGCAAA GGGGTGTGCT GTGGACCGGT
ATCCTGGGAG GACTGGCATC TTCCACCGCA ACCACGTTGG CTTTGGCTCG CTACGCACGC
GAGCAGCCTT CGCTGACAGG CGCGGCGGTA GCCGGCACGT TGGCATCCTG TGGCGTCATG
TTTTTTCGCA TGGTCGTTCT GCTGGGTGTC ATCCAGCCGG CGCTGCTGTC CACCTTCGGC
AGCGCCCTGG TGGTCACTGG CGTGGCACTG CTGTGTATTG CGCTATGGGG GTGGCGCAAG
TTGGACCGCA CTGTAGTGGG GGAGGGCGCT GTCGGCGCGA TGGCGCCATT CGACCTTGGC
ACCGCGCTCG GTTTTGGTGT GCTGCTCGCT GTCATGAGCG TCCTGGTGCC CGCGGCAAAG
CAGTGGCTGG ACACCAGCGG CCTCTATGTG CTGTCGGCGG TTTCAGGCCT TGCCGACGTG
GATGCGATCT TGATCTCGGT CGCTCGGCTG CATGGTGCCG GTGGATTGTC CACGGGCGCC
ACCGTCACGG CGCTCGGTCT CGCGACATTG GCAAACATGG TGGCAAAGGT CGGCATCGCC
TGGACGACAG GCGGCGCGCA GGTCGGTAAA TCGGTTGTTT TCGGCTACCT GGGTGCGATG
GCGTCCGGAG CTGCCGTATT GGCGCTGAGC GTGACGTTTT CGTGA
 
Protein sequence
MVAALAVGLV IGLERGWHDR ELPEGGRVAG LRTFALTGLL GGVLGHLQPE FGAWPLLGAL 
LGLALLLTVS YARNAKLSGN LSATTPVAML LTMVLGAFAA HGNITLALSA AVVGAVLLDL
KPTLHGWLRL IDHRELTASL QLLVLSMVIL PYLPNTGLGP YAALNPYQLW WAVILIAGLS
LTGHFAMRIT GAQRGVLWTG ILGGLASSTA TTLALARYAR EQPSLTGAAV AGTLASCGVM
FFRMVVLLGV IQPALLSTFG SALVVTGVAL LCIALWGWRK LDRTVVGEGA VGAMAPFDLG
TALGFGVLLA VMSVLVPAAK QWLDTSGLYV LSAVSGLADV DAILISVARL HGAGGLSTGA
TVTALGLATL ANMVAKVGIA WTTGGAQVGK SVVFGYLGAM ASGAAVLALS VTFS