| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1461 |
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| Symbol | |
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| ID | 4671676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1521370 |
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| End bp | 1522053 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639838564 |
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| Product | two component heavy metal response transcriptional regulator |
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| Protein accession | YP_985746 |
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| Protein GI | 121593850 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATAT TGATCGTCGA AGATGAACCT AAAACCGGCG AATACCTTCG CCAGGGATTG
AGCGAGGCCG GATTTGTGGC CGACCTGGCG CAAAACGGTA GTGATGGCCT GCACCTGGCA
CTCCAAGGTG AATACGACCT CGTGATCCTG GATGTCATGC TGCCCGGACT GGATGGCTGG
CAGGTGCTGC AGTCGCTGCG CAATCGCGGA TTGCAGATGC CTGTGTTGTT CCTCACGGCG
CGGGACCAGG TGGAAGATCG GGTCAAAGGG TTGGAATTGG GCGCTGACGA CTATCTTGTC
AAGCCCTTTT CATTCGCCGA GTTGCTGGCC CGTGTACGGA CAATCTTGCG CCGGGGCCGA
GGAGGCACCG AAACCAACAC ATTGCGCGTG GCTGACCTGG AACTTGATCT GCTGCGCCGA
CGGGTCTCGC GGGGTGGCCG TCGCATTGAC CTGACAGCCA AAGAATTTGG TTTGCTGGAG
TTGCTGTTGC GCAGGCATGG AGAAGTGCTT CCTCGCTCGC TGATTGCCTC CCAGGTGTGG
GACATGAACT TCGACAGCGA CACCAACGTG ATCGAAGTGG CGATGCGCCG CTTGCGCCTG
AAGATTGACG AAGGCCAGGA CGTCAAGTTG ATCCAGACCG TGCGGGGCAT GGGCTACGTG
CTGGAAGCAC CGGAGAACGC TTGA
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| Protein sequence | MKILIVEDEP KTGEYLRQGL SEAGFVADLA QNGSDGLHLA LQGEYDLVIL DVMLPGLDGW
QVLQSLRNRG LQMPVLFLTA RDQVEDRVKG LELGADDYLV KPFSFAELLA RVRTILRRGR
GGTETNTLRV ADLELDLLRR RVSRGGRRID LTAKEFGLLE LLLRRHGEVL PRSLIASQVW
DMNFDSDTNV IEVAMRRLRL KIDEGQDVKL IQTVRGMGYV LEAPENA
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