Gene Ajs_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1373 
Symbol 
ID4674376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1441502 
End bp1441981 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content63% 
IMG OID639838484 
ProductMerR family transcriptional regulator 
Protein accessionYP_985666 
Protein GI121593770 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02044] Cu(I)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.366441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG GTGAAGCGTC CACGGCATCG AAGGTCTCGG CCAAGATGAT CCGCTACTAC 
GAGGAAATCG GCCTGATCCC GCCGGCGAAC CGAACCGACG CGGGCTACCG CGCCTACACG
CAGTCCGATG TGCACCGGCT GCATTTCATC CGGCGCGCGC GTGATCTCGG ATTCTCGGTC
GCCGAGATCA GGGACCTGCT GGGCCTTTGG AACAACAAGT CGCGCCAGAG CAGCGACGTC
AAGCGCCTGG CCCAAGAGCA CATCGAGGAC CTTGAGCGAC GCATCGAGAG CATGTTGCAG
ATGGCCGAGA CGCTTAAGAC GCTGATCAGT TGCTGCGCGG GCGATGACCG GCCTGACTGC
CCCATCCTGC ATACCCTTGA GCAGCCGGAC GACAACGATG GAGAACCCGA GGCGCGCACG
GGGGCAGTGC AACGCCGACG GCGCACTCCT GCATCAAAGA AGGGCTCACG AGCACGCTGA
 
Protein sequence
MNIGEASTAS KVSAKMIRYY EEIGLIPPAN RTDAGYRAYT QSDVHRLHFI RRARDLGFSV 
AEIRDLLGLW NNKSRQSSDV KRLAQEHIED LERRIESMLQ MAETLKTLIS CCAGDDRPDC
PILHTLEQPD DNDGEPEART GAVQRRRRTP ASKKGSRAR