Gene Ajs_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1336 
Symbol 
ID4674647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1404762 
End bp1405202 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content67% 
IMG OID639838447 
ProductMerR family transcriptional regulator 
Protein accessionYP_985631 
Protein GI121593735 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02047] Cd(II)/Pb(II)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.200551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.195494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GCGAACTGGC CCAGGCCAGC GGAACGCCCA TCGAGACGAT CCGCTTCTAT 
GAACGAGAGG GGCTGCTGCC GGCCGCCGCG CGCACGGAGG GCAACTACTG CATCTACACC
CCGCAGCATG CGGATCGGCT GGGGTTCATC CGCCAGTGCC GCAGCCTGGA CATGACGCTT
GACGAGGTGC GGGTGCTGCT GCGTTTCAAG GACCAACCCT TGGCCGATTG CGGCGAGGTG
AACAGCCTGC TGGACGAGCA CATCGGCCAT GTGGCCGAGC GGATCAAGGC CCTGCGCGCC
CTTGAGAAGG AGCTGAGGGC GCTGCGGGCG GCCTGCCCCG TGCCTCATGC CTCTGCCGAC
TGCGGCATCC TCCAGGGCAT CGATCACGCA GGTGCGAAAC CTGCGGCGGC TTCCAAGCGC
CATGTGCGCG GCGCTCACTG A
 
Protein sequence
MRIGELAQAS GTPIETIRFY EREGLLPAAA RTEGNYCIYT PQHADRLGFI RQCRSLDMTL 
DEVRVLLRFK DQPLADCGEV NSLLDEHIGH VAERIKALRA LEKELRALRA ACPVPHASAD
CGILQGIDHA GAKPAAASKR HVRGAH