| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1330 |
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| Symbol | |
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| ID | 4674702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1398055 |
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| End bp | 1399173 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639838441 |
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| Product | hypothetical protein |
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| Protein accession | YP_985625 |
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| Protein GI | 121593729 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.060147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.335287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCG CTTCTTTGCA TCGCCTGGCC TGGCTCGGCG TGGTGCTGGC ACTCGTGGGC
CCACTGACCG CGCAGGCCGG GGAAGGCCAT GACCACGGCG ACGCACCCGC TGCGCCGAGC
GCAAACGGCC CCCAACGCCA GCCCGACGGC AGCGTGTTCC TGCCCAAGCC GGCCCAGCGC
CAGCTGGGAG TACGTACGAT GGTGGCTGCT GAGGCCGAGC TGCCGCGCTC GGTCGAGCTG
AACGGCAAGG TGCTGATGGA TCCCAACGCC GGCGGCAAGG TGCAGCCGCT GAACGCCGGC
CGCATCGAGC CCGGTCCACG CGGCCTGCCC AACCCGGGAC AGGTGGTGCG CAAGGGCGAG
GTGCTGGCCT ACGTGGTGCC CTCGACCGCG CCCATCGAGA GATCGAATCA ATCCGCGCAA
TTGGCCGAGT TGCGCGCGGC CAAGTCGCTC GCCGACAAGC GCGTGACGCG GCTGAAGGAG
TTGTCGGATA CCGTGCCGCG CAAGGACATC GAGGCGGCCG AAAGCGAGGC AGCCAGCCTG
GCCGAGCGCA TGGCGGCCGT TGGCGGCGGC CTGGCAACGC GGGAAGCGCT GGTGGCCCCG
GTGTCGGGCG TGATCGCCTC GGCCCATGTG GTGGCCGGTC AGGTGGTCGA TGCCCGCGAA
CTGCTGTTCG AGATCATCGA CCCGAGCCGC TTGCGCATCG AGGCACTGGC CTTCGAGCCC
TCGCTCGCGG CCAATGTCGG CAGTGCCACG CTGGCAGTCG GTGACCAGCG TGTGCCGCTG
GAGTACCTGG GTGCGGCGCG CAGCCTGCGC GAGCAAGCGC TGCCGCTGGG CTTCCGCGCT
CAGGGTGCGG CCCTGAACGG CTTGGCCGTA GGACAACCCG TGCGCGTCTT CGTGCAGACG
AAGCAGAAGG TCAAGGGCAT CGCGGTCCCG GTCGCGTCGC TGATGAAGAA CCCGGCCAAC
CAGACCGTCG TCTGGGTCAA GACTTCGCCC GAGCGCTTCG AGCCTCGCAG CATCACGACC
GAGGCCCTCG ATGGTGTGAA CGTCGCGGTC ACATCGGGCC TGAAGGCCGG GGACCGCATC
GCCACCCAAG GCGCCACCCT GATCAACCAG GTGCGCTGA
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| Protein sequence | MKRASLHRLA WLGVVLALVG PLTAQAGEGH DHGDAPAAPS ANGPQRQPDG SVFLPKPAQR
QLGVRTMVAA EAELPRSVEL NGKVLMDPNA GGKVQPLNAG RIEPGPRGLP NPGQVVRKGE
VLAYVVPSTA PIERSNQSAQ LAELRAAKSL ADKRVTRLKE LSDTVPRKDI EAAESEAASL
AERMAAVGGG LATREALVAP VSGVIASAHV VAGQVVDARE LLFEIIDPSR LRIEALAFEP
SLAANVGSAT LAVGDQRVPL EYLGAARSLR EQALPLGFRA QGAALNGLAV GQPVRVFVQT
KQKVKGIAVP VASLMKNPAN QTVVWVKTSP ERFEPRSITT EALDGVNVAV TSGLKAGDRI
ATQGATLINQ VR
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