| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1327 |
|---|
| Symbol | |
|---|
| ID | 4674709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1393966 |
|---|
| End bp | 1394502 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639838438 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_985622 |
|---|
| Protein GI | 121593726 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.887746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.267276 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCG ACCGATTGAC CTGTGCCTCG GTGGTCTTGG TGGCTGGGCT GCTGGCGGGC
TGCGCCACGC CGCCCGCACC CGATCCCACC GTCGAGATCC CGTACTGCCA CAAAACCAAC
AAGGGCCGGG TGATCGCCTG CACCACGGCT CCGGCGCCGA GCCTGAACGC CGATGCGCAG
GCCAAACAGT TCGCGCCTGA CCCGAACGCC CTCACCGTGT ACGTCGTGCG GCGCAACTGG
GGCGACGGCC GGAACTTCGT GAAGGTTCAG GCCGACGGCG GAGCCGCCGT CGAGACCCTG
CCGAACACGA TGGTGCGCTA CCGGCTGAAG CCGGGTTCGC ACTCGATCGC CTTCGACTTC
GAGGGGCAGC GTCCAGCGAC GACGGTCGCG GGCAAGGCGG GCGAAGTGCG GTTCGTCCGG
CTCGACGGCA TGGTCTGGGC CTGGAAGAGC ACGTTCACCT GGGCGACCGA ATCCGAGGAC
GCGATCCGCG AACGAGCGCT GAAGGCAAGG CTGGTGGCCG ACTTGGCGGT ACGCTGA
|
|---|
| Protein sequence | MTADRLTCAS VVLVAGLLAG CATPPAPDPT VEIPYCHKTN KGRVIACTTA PAPSLNADAQ
AKQFAPDPNA LTVYVVRRNW GDGRNFVKVQ ADGGAAVETL PNTMVRYRLK PGSHSIAFDF
EGQRPATTVA GKAGEVRFVR LDGMVWAWKS TFTWATESED AIRERALKAR LVADLAVR
|
|---|
| |