Gene Ajs_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1315 
Symbol 
ID4674141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1382944 
End bp1384179 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content67% 
IMG OID639838427 
Producthypothetical protein 
Protein accessionYP_985611 
Protein GI121593715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.85058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.213847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTGG ACGACACCGC ACCACGTCGT GGCCCCATCG CACTCGCAGA CCTGTTCGAC 
GCTGCGCTGA AAGACCTTGT GCCCAAGCCC AACGCCGATG CGCCCCCGCC CACACCCACG
CCTGTCGCGA TGCCCACGGG CCCGGCGTCT GGCGATGCCT TCCTGTTCAG CGGCAACCGG
CACGAGACCG TACCGCGACG GCTGTTCCTC GACCGTCGCC TGACGCCGCT GGAGCGCAAC
GCCTGGCAGG TCTTCCGGCT GATGCTCAAC GACGATGGCG TGACGGCGTT CCCGACGTAT
GAACAGCTTC GGCCCTGGCT GGCGTCGATG CCGTGCGCCG GGCAAGCCTC GCACGAAACC
GTGGCGCGAG CGCTGACGCT GCTGCGCCTG ACGCGCTGGC TGAGCCTCGT GCGACGACGG
CGCGACCCCA AGACCGGCCG CATCCTCGGA AACCTCTACG TCCTGCATGA CGAACCCCTG
ACACCGTTCG AGGCCATGCA GCTCGACGCC GACTACCTGG CCCTGGTCAG CCAGTCGCTG
GGGCATTCGG CCAAGGCCGT TCAGGTGGTG GGACTCAACA CCCTCCAGGA GATCGCGGAC
GACCCGATGT TGTCCGGACG CACCTTGCCG TCGCGGCTGC AAGTGCTCGC CGAGCGCCTG
GCCGACCAGG GCATCACCGC CACTCAAAGT TATCCACAGG AGGATGCGAT CCACGATTCC
GAAGAAGGGC CCGCGAGCCT TCTTCGGAAT GGCGAACGCC CCTCTTCGGA ATCCGAAGCA
GGGCCGAAAC CCGCGCCAGA CGGCGCTCTT CGGAATCCGA AGCAGGACCG TACAGTACGT
AGTAGTCGTA TTAATGAAGT ACGTACTACC GCGCAGGCGC GTGCGCTGGG CGACCTGCAA
TGGCCCAAGC GCTTCGCGGA ACTGAAGGCG GAACAGCAGG CCGGAGCCAG GATGGCGTTG
CAGCAGGTGG ACGCTGCCCT GGGGCAGGCC GTGCTGGACG AATGGGCCGC ACGGTGCGGC
AAGCATGGCA TCCGCAACCC CGCCGGATAT CTGTTCGGCA TCATCCAGCG CGCCATGCGC
GGCGAGTTCA ATGCGTGGGC CAAGCAGACC GGCCCGGCAC CGCCAACACC ATCGGCGGCG
CGAGCGCCAC CATCCGAGCC GCCGCGCAAC GTCGTGCCGC CCGAGGTGGC CCGGCAGCAC
ATCGAGCGCC TGCGCGACCT GCTGCGCAAG ACCTGA
 
Protein sequence
MAVDDTAPRR GPIALADLFD AALKDLVPKP NADAPPPTPT PVAMPTGPAS GDAFLFSGNR 
HETVPRRLFL DRRLTPLERN AWQVFRLMLN DDGVTAFPTY EQLRPWLASM PCAGQASHET
VARALTLLRL TRWLSLVRRR RDPKTGRILG NLYVLHDEPL TPFEAMQLDA DYLALVSQSL
GHSAKAVQVV GLNTLQEIAD DPMLSGRTLP SRLQVLAERL ADQGITATQS YPQEDAIHDS
EEGPASLLRN GERPSSESEA GPKPAPDGAL RNPKQDRTVR SSRINEVRTT AQARALGDLQ
WPKRFAELKA EQQAGARMAL QQVDAALGQA VLDEWAARCG KHGIRNPAGY LFGIIQRAMR
GEFNAWAKQT GPAPPTPSAA RAPPSEPPRN VVPPEVARQH IERLRDLLRK T