Gene Ajs_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1301 
Symbol 
ID4673743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1370617 
End bp1371024 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content63% 
IMG OID639838415 
ProductMerR family transcriptional regulator 
Protein accessionYP_985599 
Protein GI121593703 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02051] Hg(II)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.440008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAACG CTCAAGAGAA TCTGACCATC GGGGCCTTCG CCAAGGCAGC CCGGGTCAAC 
GTGGAGACGA TCCGCTTCTA TCAGCTCAAG GGCTTGCTAC CCCAGCCGGA GCGGCCCTAC
GGTCGCATCC GCCGCTACGG GCAGGCGGAC GTGGCGCGGG TGAAGTTCGT GAAGTCAGCC
CAGCGCCTGG GATTCAGCCT GGATGAAGTC GGCCAGCTCC TGAAACTGGA GGACGGCACC
CATTGCAGCG AGGCGGCCGA ACTGGCTGCT CACCGGCTGG CCGATGTGCG CGCACGCATG
GCGGACCTCA CGCGGATGGA AGAGGCCCTG TCGACGCTAG TGAGAGAGTG CAACGCGCAC
CATGGCAATG TTTCCTGCCC GTTGATCGCA GCTTTGCATT GCTGCTAA
 
Protein sequence
MENAQENLTI GAFAKAARVN VETIRFYQLK GLLPQPERPY GRIRRYGQAD VARVKFVKSA 
QRLGFSLDEV GQLLKLEDGT HCSEAAELAA HRLADVRARM ADLTRMEEAL STLVRECNAH
HGNVSCPLIA ALHCC