| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1294 |
|---|
| Symbol | |
|---|
| ID | 4673575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1365018 |
|---|
| End bp | 1365947 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639838410 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_985594 |
|---|
| Protein GI | 121593698 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.923114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA CGTCCAACGA GAAATCGTAT TTCGACCTCC ACACCTCGGG CATCGGCTAC
ATCCAGCGTG TCCGTGAAGT GCCCGTCCGG GGCGGCCGCC GTGCGCAGCC TTTCCTGGCT
TGCACCATCG CCGCGCTGGT CGGCCCCGCC CGGGACCCCA GCTACCGCTA CTTCGACGTC
AAGGTCTCGG GAGCCGAGGC CAAGAAGCTC GTTCAGCGCT ACATCGGCGT TGACGATCCC
AAGCAGCGCC CGCTGGTGCG CTTTCGCCTC GGTGACCTGT GGGGCGATGC GTACATCCGC
GACAAGGGTG AGCAGAAGGG TCAGGCCGCC GCGTCCCTCA AGGCGCGACT GCTCAAGGCC
GAACTGATCG ACCGGGCCGA ACTGGCTTCG ATCGAGCAGC ACGAGCTGAT CACCCGCGGC
ATCGGCTATC TCAATCGTGT GAAGGACGTC ACCCCGAAGG CTGGCGACTC GTTCCTCTCT
TGCACGGTCG CAGCACTGGC CGGGCCTGTC GATGAACCGG AGTATCGGTA CTTCGACATC
ATCGTCGCCA CCCCGGAAGC CGAGCATCTG GCTCGCCGGT GCGTCCAGGC CATCGAGGGG
GACCGTAAGG TCCTGATCGC CTTCCGTCTG AACGACATGA AGATCGATCC GTACATCCGC
ACCAAGGGCG AGCACGCCGG GGAACCGGCC GCAAGCCTGG AATCGACGCT GGTCCACATC
GGTCTCATCA AGATCGACGG TACCCAGGTC TATCCGACGA GCCAGGCGCA AGCCGAGGCG
TCGCCGGCCG AAGACGCATC CGCGTCCGAA GCCGACGAAG CCATCGACAC TGCTGCCGAC
CCCGCTGCAG ACCAGCCTGC CGAGCCCGCC GAGCGCGAGC CCGAGGCGCA AGTCGAGGAG
CAGGAGCCGG CATTGGCTGC TTCGTTCTGA
|
|---|
| Protein sequence | MNTTSNEKSY FDLHTSGIGY IQRVREVPVR GGRRAQPFLA CTIAALVGPA RDPSYRYFDV
KVSGAEAKKL VQRYIGVDDP KQRPLVRFRL GDLWGDAYIR DKGEQKGQAA ASLKARLLKA
ELIDRAELAS IEQHELITRG IGYLNRVKDV TPKAGDSFLS CTVAALAGPV DEPEYRYFDI
IVATPEAEHL ARRCVQAIEG DRKVLIAFRL NDMKIDPYIR TKGEHAGEPA ASLESTLVHI
GLIKIDGTQV YPTSQAQAEA SPAEDASASE ADEAIDTAAD PAADQPAEPA EREPEAQVEE
QEPALAASF
|
|---|
| |