Gene Ajs_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1281 
Symbol 
ID4673106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1355196 
End bp1355690 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content62% 
IMG OID639838397 
Productprotein tyrosine phosphatase 
Protein accessionYP_985581 
Protein GI121593685 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.395414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CCACTTACAA CGCCTTGTTC ATCTGTACGG GCAATTCGGC CCGCTCCATC 
CTCGCCGAAG GCATCCTCAA CGACATAGGC CAGGGGCGGT TTCACGCCTG GTCGGCAGGC
AGCCATCCGA AAGGCGAGGT TCACCCGCTG GCGCTCGCTA CGCTAGAGCG GCTGCACCTG
CCGACAACGG GCTACCGCAG CAAGAGCTGG GACGAATTCT TGAAGCCCGA TGCGCCGGTG
TTCGATTTCA TCTTCACTGT CTGCGACAAC GCCGCCGGCG AGGCCTGTCC GCTGTGGCCG
GGCAAGCCGG TTTCGGCGCA TTGGGGCGTG CCTGACCCGG CCGCGGTGGA AGGCACCCAG
GAACGACAAA GCAAAGCATT CTTCGACACC GCCATGACGC TGCGCCGACG CATCGAGTTG
TTCCTGTCGC TGCCGATCAA AAGTCTCGAT GCCATGTCGT TGCAGCGCGA ATTGCGCGAC
ATCGGCCGTC AGTGA
 
Protein sequence
MTDTTYNALF ICTGNSARSI LAEGILNDIG QGRFHAWSAG SHPKGEVHPL ALATLERLHL 
PTTGYRSKSW DEFLKPDAPV FDFIFTVCDN AAGEACPLWP GKPVSAHWGV PDPAAVEGTQ
ERQSKAFFDT AMTLRRRIEL FLSLPIKSLD AMSLQRELRD IGRQ