| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1265 |
|---|
| Symbol | |
|---|
| ID | 4673171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1341425 |
|---|
| End bp | 1341895 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639838381 |
|---|
| Product | DNA binding domain-containing protein |
|---|
| Protein accession | YP_985565 |
|---|
| Protein GI | 121593669 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG CCACTGCCCA ATCCAAGATG ACCCTTCCCG CCGCGGGAGA GGTTAAGGCA
GCCGTCCAGG GTCAACGTGC CTTGGCGGCT TACCTCGCAA CCCAGTTCGA GACGCAGCAC
ATCCAGATCT TTGATGACCA CAAACAGGCT CATCAGGTGG AACTGCCTAC CTCGGCTTTA
CGCCTGCTGG TCGACATCCT GGCCGAGTTG GCCGATGGCA ATGCAGTAAA GGTGGTGCCC
GTCCATGCAG AGCTGACGAC CCAAGAGGCG GCGGACTTGC TCAACGTGTC CCGTCCCCAT
TTCGTCAAGC TGCTAGAAGA TGGGGTGTTG GCATTTCATC GCACCGGCAA GCACCGCAGG
GTGAGGTTCG CCGATCTGAT GCAGTACAAG GAAGCGCGCG AGCGCGCCAG TGAGCAGGCG
ATGGCCGAAC TCGCTCAGCA GTCGCAAGAG TTGGGAATGG GATACGAATG A
|
|---|
| Protein sequence | MTTATAQSKM TLPAAGEVKA AVQGQRALAA YLATQFETQH IQIFDDHKQA HQVELPTSAL
RLLVDILAEL ADGNAVKVVP VHAELTTQEA ADLLNVSRPH FVKLLEDGVL AFHRTGKHRR
VRFADLMQYK EARERASEQA MAELAQQSQE LGMGYE
|
|---|
| |