| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1256 |
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| Symbol | |
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| ID | 4673257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1333487 |
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| End bp | 1336378 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639838372 |
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| Product | hypothetical protein |
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| Protein accession | YP_985556 |
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| Protein GI | 121593660 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTGGA AACTCCCATG GCCGAAGCTG GCCGGCGCCG GCTCCAGTAG CCCGGCCAGC
GATGAGCAGC CGGACAGCTG GCAGCGCCAC GTCGAGGCCT TGCGCCAGGC CGGCATCCCC
GAACCCGGTT CGGCAGTCCA CGGCCGCAAG CCAGCGACCG TGGCCGACGA GCAGGCGCTG
TACGACGTTG CGCCGTCCTT CGTGGAACTG CTGCCCTGGG TGGAGTTCAT GCCCGAGTCG
AAATCGATGC TCCTGGAGGA CGGCCAATCG GTGGCGGCGT TCTACGAGCT GGTGCCGCTG
GGCACCGAAG GCCGGGAACC CGGCTGGCTC GCGCATGCCC GCGACGCCCT GGAAAACGCG
CTTCAGGACA GTTTCGATGA ACTGGACGAG AACCCGTGGG TGCTCCAGCT CTATGCCCAG
GACGAACCGA GCTTCGACCA GTACATGCAG ACCTTGCGCG ATTACGTGCA GCCACGTGCG
CGCGGCTCGG CGTTCACCGA GTTCTACCTG CGCTTCTTCG GCCACCACCT GCGCGCTGTG
GCCAAGCCCG GCGGCCTGTT CGAGGACACG GTGGTCACGC GGCTGCGCTG GCGCGGCCAG
ACGCGGCGCG TGCGCATGGT GGTGTACCGC CGCGCGAGCG GACAGGGACA GGCAAACCGC
CGCGGCCAGA CACCCGAGCA GATGCTGGGC ATCGTCTGCG ACCGCCTGTG CGGCGGCCTG
GCGAACGCCG GCATCCAGGC CCGGCGCATG GTCGCGGCCG ACGTCCACGA CTGGCTGCTG
CGGTGGTTCA ACCCGCGCCC CACGCTGCTC GGGCCTGGGG TGGAGGACCG GGAGCGCTTC
TACGCGTTGG CGCGCTATCC GGACAGTACC GAGGAAAGCG AGGCCGGCGA GATCGAGCTG
GCGAGCGGGC GGGATTTCAG CCAGCGGCTG TTCTTTGGGC AGCCGCGCTC GGACGTGGCG
CAAGGGGCCT GGTACTTCGA CGGCATGCCG CACCGCGTGC TGATCACCGA CCGGCTGCGC
ATGCCGCCCG GCACCGGGCA CCTGACCGGC GAGACCCGCA AGGGGGACGC GATCAACACG
CTGTTCGACC AGATGCCCGA GGACACCTTG ATGTGTCTCA CGATGGTCGC CACGCCGCAG
GATGTGCTGG AAGCGGACTT GAACCACCTG GCGAAGAAGG CCGTGGGCGA GACGCTGGCG
TCGGAGCAGA CGCTCAAGGA CGTGCATGAA GCCCGCTCCC TGATCGGCAG CGCGCACAAG
CTCTACCGGG GCACTCTGGC GTTCTACCTA CGCGGGCGCG ACGAGGCGGA ACTGGATCGG
CGCGGCCTGG ACCTCGCGAA CGTGATGCTC AACGCCGGCC TGCAGCCGGT GCGCGAGGAC
GACGAGGTGG CGCCGCTCAA CAGCTACCTG CGCTGGCTGC CGTGCTGCTA CAACCCCGGC
CAGGATCGGC GCCGGTGGTA CACGCAACTG ATGTTCGCCC AGCATGCGGC GAACCTGTCG
CCGGTGTGGG GCCGCGCCCA GGGCACGGGG CATCCCGGCA TCACGATGTT CAATCGCGGC
GGCGGCCCGA TCACGTTCGA TCCGCTCAAC CGCCTAGACC GACAGATGAA CGCCCACTTG
TTCCTGTTCG GCCCCACCGG CTCCGGCAAG AGCGCCACGC TCAACAACCT ATTGAATCAG
GTCACGGCCA TCTACCGGCC AAGGCTGTTC ATCGTGGAAG CCGGCAACAG CTTCGGCCTG
TTCAGCGACT TCGCCAAGCG CCTGGGCCTG ACCGTGAACC GGGTCAAGCT GGCCCCCGGA
TCGGGCATCA GCCTGGCGCC GTTCGCCGAC GCACGCCGGC TGATCGAAAC GCCCAGCGAC
GTGCAGACGC TCGATGCCGA TGCGCTGGAC GAAGACCTGC CACCGGATGC CTCGGCCATG
GAGGCGGATG AGCAGCGCGA CGTGCTGGGC GAACTGGAGA TCACGGCACG GCTGATGATC
ACGGGCGGCG AAGACAAGGA AGAAGCGCGG ATGACGCGGG CCGACCGCTC GCTGATCCGC
CAGTGCATCC TCGACGCCGC CGAACATTGC GTGGCGGAGA AGCGCACCGT GCTCACGCGC
GATGTGCGCA ATGCACTGCG CACCCGTGGC CAGGACCCGA CGTTGCCCGA GATGCGCCGT
GCGCGGCTGC TGGAGATGGC GGACGCGATG GACATGTTCT GCCAAGGCAC GGACGGCGAG
ATGTTCGACC GCGACGGCAC GCCGTGGCCC GAGGCCGACA TCACGCTGGT CGATCTGGCG
ACCTATGCCC GCGAGGGCTA CAACGCGCAG CTCTCCATCG CCTACATCAG CCTGATCAGC
ACGGTGAACA ACATCGCCGA GCGCGACCAG TACCTGGGAC GGCCGATCGT CAACGTGACC
GACGAAGGTC ACATCATCAC CAAGAACCCG CTGCTCGCGC CCTATGTCGT GAAAATTACA
AAAATGTGGC GCAAGTTGGG CGCCTGGTTC TGGCTGGCGA CGCAGAACAT CGACGACCTG
CCACGTGCAG CGGAGCCGAT GCTCAACATG ATCGAGTGGT GGGTGTGCCT GTCGATGCCG
CCGGACGAGG TGGAGAAGAT CGCGCGCTTC CGCGAACTCT CGCCGGCGCA GAAGGCGCTG
ATGCTCTCCG CACGCAAGGA AGCGGGCAAG TTCACCGAGG GCGTCATCCT CTCCAAGAGC
ATGGAAGTGC TGTTCCGCGC CGTGCCGCCA AGTCTCTACC TCGCGCTCGC GCAAACCGAG
CCCGAGGAGA AGGCAGAACG CTACCAACTC ATGCAGCAGC ACGGCGTCAG CGAGCTGGAT
GCCGCCTTCA AGGTGGCTGA GAAGATCGAC CGGGCACGTG GCATCGAGTC GCCGACCCTG
GACCTGCCCT GA
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| Protein sequence | MRWKLPWPKL AGAGSSSPAS DEQPDSWQRH VEALRQAGIP EPGSAVHGRK PATVADEQAL
YDVAPSFVEL LPWVEFMPES KSMLLEDGQS VAAFYELVPL GTEGREPGWL AHARDALENA
LQDSFDELDE NPWVLQLYAQ DEPSFDQYMQ TLRDYVQPRA RGSAFTEFYL RFFGHHLRAV
AKPGGLFEDT VVTRLRWRGQ TRRVRMVVYR RASGQGQANR RGQTPEQMLG IVCDRLCGGL
ANAGIQARRM VAADVHDWLL RWFNPRPTLL GPGVEDRERF YALARYPDST EESEAGEIEL
ASGRDFSQRL FFGQPRSDVA QGAWYFDGMP HRVLITDRLR MPPGTGHLTG ETRKGDAINT
LFDQMPEDTL MCLTMVATPQ DVLEADLNHL AKKAVGETLA SEQTLKDVHE ARSLIGSAHK
LYRGTLAFYL RGRDEAELDR RGLDLANVML NAGLQPVRED DEVAPLNSYL RWLPCCYNPG
QDRRRWYTQL MFAQHAANLS PVWGRAQGTG HPGITMFNRG GGPITFDPLN RLDRQMNAHL
FLFGPTGSGK SATLNNLLNQ VTAIYRPRLF IVEAGNSFGL FSDFAKRLGL TVNRVKLAPG
SGISLAPFAD ARRLIETPSD VQTLDADALD EDLPPDASAM EADEQRDVLG ELEITARLMI
TGGEDKEEAR MTRADRSLIR QCILDAAEHC VAEKRTVLTR DVRNALRTRG QDPTLPEMRR
ARLLEMADAM DMFCQGTDGE MFDRDGTPWP EADITLVDLA TYAREGYNAQ LSIAYISLIS
TVNNIAERDQ YLGRPIVNVT DEGHIITKNP LLAPYVVKIT KMWRKLGAWF WLATQNIDDL
PRAAEPMLNM IEWWVCLSMP PDEVEKIARF RELSPAQKAL MLSARKEAGK FTEGVILSKS
MEVLFRAVPP SLYLALAQTE PEEKAERYQL MQQHGVSELD AAFKVAEKID RARGIESPTL
DLP
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