| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1238 |
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| Symbol | |
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| ID | 4673851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1315520 |
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| End bp | 1316680 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639838355 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_985539 |
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| Protein GI | 121593643 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGAT TGGGACGTCC CGGACTGTCG GATGCGCAGA GGCGCGAGTT GTGGGAGCGC
TGGAAGGCAG GGGATTCCAT CAGCGACATC GGTCGTGCGT TGTTCAAGTA CCCTGGGTCT
GTGCATGGGG TTCTCGCGCT AGGCGGAGGC ATCTATAGAC CAGCGCGGAA ACGGGCAGCC
TCGGCGTTGA CAGCAGATGA TCGTGAGCAG GTCTCTCGCG GCTTGGCGGC GGGGCACTCT
TGCAGGCAGA TCGCCGCGGA ACTTGGTCGT TCGCCTTCAA CGATCAGCCG AGAGGTACAT
CGCAATGGTG GTGCCGCGCG ATATCGTGCG GCTGTGGCCG ATGAGCGAGC CTGGGAGCAA
GCACGCCGCA CCAAACCTTG TGCGTTGGCA CTGAATCCTG AGCTGACCAG CCTTGTGGCC
CAGAAGTTGG CACTTCAGTG GTCTCCACAG CAAATCGCTG GATGGCTGCG ACGAGAACAC
CCGGATACTG CCTGCATGCA GGTGTCGCAC GAGACGATCT ATCGCAGTCT CTTCGTACAG
GCGCGCGGCG TGCTGAAGAA GGAGCTGATG GCGCATCTTC GTACTCGTCG CTCAATGCGG
CGAGCGCGAG CAGGCCTGGG CAAGGAGTCT CCTCGTGGGC AGATCACTGA CGCCGTATCC
ATCCACAGCC GTCCCGCGCA GATCGAAGAC CGGGCGGTTC CTGGTCATTG GGAAGGTGAC
TTGGTCACGG GAGCAAAGAA TAGCCACATT GCGACGCTGG TGGAGCGTCA TTCACGTTTC
GCGCTACTGG TCCAGGTCGA TGGCAAGGAC ACGGCCAGCG TGGTGCAGGC TTTGACGCGT
GAAGTCAAGC GACTCCCAGG AGGCTTGATG AAATCATTGA CCTGGGATCG GGGCATGGAG
CTGGCCCTGC ACCGAACGTT CTCCATGGCC ACTGAAGTCG ATGTGTTCTT CTGCGATCCA
CGAAGCCCGT GGCAGCGAGG AACGAACGAG AACACCAATG GGTTGGTGCG TCAGTACCTT
CCCAAGGGTG CGGACCTATC GGTCTACAGC CAGGAAGACC TGGACGCGAT CTCCATGCGT
TTGAACATGA GGCCTCGAAA AACGCTGGAC TATGAAACTC CTGCCAGTAG ACTTCAGCGA
GCCGTTGCAG CGACGGGTTG A
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| Protein sequence | MARLGRPGLS DAQRRELWER WKAGDSISDI GRALFKYPGS VHGVLALGGG IYRPARKRAA
SALTADDREQ VSRGLAAGHS CRQIAAELGR SPSTISREVH RNGGAARYRA AVADERAWEQ
ARRTKPCALA LNPELTSLVA QKLALQWSPQ QIAGWLRREH PDTACMQVSH ETIYRSLFVQ
ARGVLKKELM AHLRTRRSMR RARAGLGKES PRGQITDAVS IHSRPAQIED RAVPGHWEGD
LVTGAKNSHI ATLVERHSRF ALLVQVDGKD TASVVQALTR EVKRLPGGLM KSLTWDRGME
LALHRTFSMA TEVDVFFCDP RSPWQRGTNE NTNGLVRQYL PKGADLSVYS QEDLDAISMR
LNMRPRKTLD YETPASRLQR AVAATG
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