| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1235 |
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| Symbol | |
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| ID | 4673849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1312375 |
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| End bp | 1314267 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639838353 |
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| Product | CopA family copper resistance protein |
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| Protein accession | YP_985537 |
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| Protein GI | 121593641 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCTC GTTCACCCTT TTTTATCGTG CCCACACAGG GCCTTTCTCG TCGGCGTTTC
GTCCAAGGGT TAGCCGCCGG CGGCGTTCTC GCTGGGCTGT CCACGCCGGC GTTCAAGGCA
TTTGCCCAGC AAGGCTCCGC GACGCGCGGT GCCGCCCCTG TGCTGAAGGG CACCGACTTC
GACTTGGTGA TCGCCGAATC GCCCGTGAAC TTCACGGGCA AGCCAGGCGT GGCTACGACC
ATCAACGGCT CGCTGCCGGC ACCGACATTG CGTTGGCGCG AGGGTGACAC CGTCACAATC
CGTGTAACCA ACAAGCTGCG TGAAGCCACA TCCATTCACT GGCACGGGAT CATCCTGCCG
TATCAGATGG ATGGCGTGCC GGGCATCAGC TTCAATGGCA TCGCTCCCGG CGAGACCTTC
ACGTACCGCT TCAAGGTTCA GCAGAGCGGC TCCTACTGGT ACCACTCGCA CTCCGGCTTT
CAGGAACTCA CGGGCATGTA CGGGGCGATC ATCATCGACC CCGCTGGCGC CGAGACCATC
CACGCCGACC GTGACCACGT GCTGCTGTTC TCGGATTGGA CCGACGAAGA CCCGATGCGG
GTGTTCACCA AGCTCAAGTC CCAAAGCGAC TATTACAACT ACAACCAACC TACCGTCTTC
GACTTCTTCC GGGACGCCTC GCGCGAAGGC ACGGCCGCTG CGATCGACAA GCGCAAGATG
TGGAACGAGA TGCGGATGAA TCCGACGGAT CTCGCAGATC TGTCTGCCGC CACGCTGACC
TATCTGGCCA ACGGCGTCAC CCCCGCCGGC AATTGGACGG CGCTGTTCCG ACCGGGTGAG
CGCGTGCGGC TGCGCATGGT CAACGGTGCG GGCAACACCT TCTACGACGT ACGCATTCCA
GGACTGAAAC TCACGGTGGT GCACGTCGAT GGTGTTGACG TGGAGCCGGT GACCGTCGAT
GAGTTCCGAT TCGGTCCTGG CGAAACCGTC GACGTGATCG TCCAGCCACG GGATGACGCT
TACACGATCT TCGCCCAGGC GATGGACCGG ACAGGCTACG CGCGTGCCAC GCTGGCCGTG
CGTGAAGGTC TTCAAGCTCC CGTGCCTGCC CTCGATCCGG TCGAATGGCT GACCATGAAC
GACATGATGG GCGGCATGAT GGGGGGCATG GACCATGGCG GGTCCGGCCA GGCCATGGAG
ATGACCGGGA TGACGGGCAT GACCGGGATG ACCGGGATGG GCTCGGGTTC GATGTCCGGG
ATGGATCATG GGGCGATGGC AGGCATGAAT CACGGCGCCA TGAACCACGG TGGCATGGCG
ATGGATCACA GCCAACACGC CGCGGCGGCG GGGGGACTGG CCGTGCCCAG CACTACTGCT
CGCCACGCTC GCACCGAGTA TGGTGCCAGC ACGGACATGC GCGTTGACAT GGCGCGCACC
AACCTCGATG ACCCCGGCAT CGGACTGCGC AACAACGGTC GGCGCGTGTT GACCCTCGCG
GATCTGCATA CCCCGTCGGG GCCGCTGGAC AAGAGAGGCC CCGGCCGGGA GGTCGAACTG
CACCTCACGG GCAACATGGA ACGCTACGCA TGGTCCCTGG ACGGGCTGGA GTTCGGAAAG
TCCACGCCGG TGCACTTCAA ACACGGCGAG CGGCTGCGGG TCATTCTGCA CAACGACACC
ATGATGACCC ATCCCATGCA CCTGCACGGC ATGTGGAGCG AGCTGGAAAG CCCCGACGGT
CGCTTCCTTG CGCGCCGCCA CACCCTGCCG GTGCAGCCGG CACAACGCAT CAGCTTCCTG
GTGACAGCCG ACGCGCTCGG CCGCTGGGCG TGGCACTGCC ACCTGATGTT CCACATGGAT
GCCGGCATGT TCCGCGAAGT CGTGGTGTCT TGA
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| Protein sequence | MPPRSPFFIV PTQGLSRRRF VQGLAAGGVL AGLSTPAFKA FAQQGSATRG AAPVLKGTDF
DLVIAESPVN FTGKPGVATT INGSLPAPTL RWREGDTVTI RVTNKLREAT SIHWHGIILP
YQMDGVPGIS FNGIAPGETF TYRFKVQQSG SYWYHSHSGF QELTGMYGAI IIDPAGAETI
HADRDHVLLF SDWTDEDPMR VFTKLKSQSD YYNYNQPTVF DFFRDASREG TAAAIDKRKM
WNEMRMNPTD LADLSAATLT YLANGVTPAG NWTALFRPGE RVRLRMVNGA GNTFYDVRIP
GLKLTVVHVD GVDVEPVTVD EFRFGPGETV DVIVQPRDDA YTIFAQAMDR TGYARATLAV
REGLQAPVPA LDPVEWLTMN DMMGGMMGGM DHGGSGQAME MTGMTGMTGM TGMGSGSMSG
MDHGAMAGMN HGAMNHGGMA MDHSQHAAAA GGLAVPSTTA RHARTEYGAS TDMRVDMART
NLDDPGIGLR NNGRRVLTLA DLHTPSGPLD KRGPGREVEL HLTGNMERYA WSLDGLEFGK
STPVHFKHGE RLRVILHNDT MMTHPMHLHG MWSELESPDG RFLARRHTLP VQPAQRISFL
VTADALGRWA WHCHLMFHMD AGMFREVVVS
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