| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1223 |
|---|
| Symbol | |
|---|
| ID | 4674655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1298335 |
|---|
| End bp | 1299231 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639838344 |
|---|
| Product | TniB family protein |
|---|
| Protein accession | YP_985528 |
|---|
| Protein GI | 121593632 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.985075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGGCG ACTATCCACA CTTGCATCCC TCCGCACGCG CATGGGCAGA CGAAGACGCG
CCGTCGCGGG TACGCCGCAT CCGCACGGAT AGGTGGATCG GCTACGCACG GGCACAGGCC
GCGTTGGCGG CAATCGAGGA TGTGCTGTCA TTCCCAAAGC GGACCCGGAT GCCGAACCTG
CTTCTGGTCG GGCCGACGAA CAACGGCAAG ACCATGATCG TGGAGAAGTT CCGGCGCAGC
CATCCGCTCA TCGCCGCGGA GGATGCCGAG GATGGCATCG CCCGTGTGCC GGTGCTGAAG
ATGCAGATGC CGGCAGGCCC CGACGAGCGG CGCTTCTTCG GAGCCATCCT CGACCAGTTG
GGAATGGACC ACTGGCCCAA GGAGCGGGTT GCCGCGCAGC AAAACCTGGC GGTTCGCCTG
ATGCGCACGA CCGACGTGCG CGTGCTCGTG ATCGACGAAT TGCATAACGT CCTCTCCGGT
CCGGTGTTGC AGCAGCGGCG TCTGCTCAAT CTGCTGCGCT GGCTCGGCAA CGAATTGCAG
ATACCGCTGG TAGGCGTTGG CACCGCTGAG GCATTGCGGG CCATCCGCAG CGATGACCAG
CTTGCCAACC GCTTCGAGCC CGTGGCGTTG CCGCTGTGGG ACGAAGATGA AGCGTATCGG
CGGCTGCTCA GCACGCTGGA GGCGCTGCTG CCCCTGCGCA AGCCGTCCGG GCTGGCGCAG
CCTGCCCTGG CAGGGAAGAT CTTTGCCCTG TCCGAAGGCG TGCTGGGTGA GATCGTCTCG
ATCGTCACAC GCGCTGCGGC CGTCGCGGTC ACCTCGGGCG CGGAGGCGAT CTCGCCACGC
CTGATCGAGA AGTCTGGGTT CATCTCGCCT ACTGGCCGCA GACGTGTGGC CGTGTGA
|
|---|
| Protein sequence | MSGDYPHLHP SARAWADEDA PSRVRRIRTD RWIGYARAQA ALAAIEDVLS FPKRTRMPNL
LLVGPTNNGK TMIVEKFRRS HPLIAAEDAE DGIARVPVLK MQMPAGPDER RFFGAILDQL
GMDHWPKERV AAQQNLAVRL MRTTDVRVLV IDELHNVLSG PVLQQRRLLN LLRWLGNELQ
IPLVGVGTAE ALRAIRSDDQ LANRFEPVAL PLWDEDEAYR RLLSTLEALL PLRKPSGLAQ
PALAGKIFAL SEGVLGEIVS IVTRAAAVAV TSGAEAISPR LIEKSGFISP TGRRRVAV
|
|---|
| |