| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1206 |
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| Symbol | |
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| ID | 4671994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1277117 |
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| End bp | 1278274 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639838328 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_985514 |
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| Protein GI | 121593618 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.427148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACC CTGTCGCACA GCGCGCCGCG GGCCTGCCGG GCCCGTCTTC ATTGCAACCC
CGCCGCGGGG TTTTTTTGTG GCCGCCGCGT GGCGGCGTGG CGGGTGCTGC ACTGGTGCTG
GCCGTGGCTG CCTTGGCGCT GGCGGGATGC TCGCGCCGCG AGCCGGCGCC AGAGCCGGTG
CGCGCGGTGA AACTGCTCAC CGTCGGCGTG GCGCCCCTGC AGATGCGCCT GGAATACGCG
GGCGAAGTGC GCGCGCGCGT GGAATCGCGC CTGGGTTTTC GCGTGGCCGG CAAGATCGTG
CAGCGCCAGG CCGAGCTGGG CCAGCGCGTG CAGGCCGGCC AGGTGTTGGC GCAGCTGGAT
CCGCGCGACT ATGAGCTGGC TGCGCAGGCC GCGCGCGCCC AGGTGGCGTC CGCCACCACG
CAGCGTGATT TGGCCGCGGC GGATTTCGAG CGCTTTTCCA AGCTGCGCGC GCAGAACTTC
ATCAGCGGGG CGGAGCTGGA CCGCCGCCAG GCTCAGCTGA AGGCCGCGCA GGCTTCGCTG
GACCAGGCGC GCGCGCAGCT CGCTTCCCAG GGCAACCAGA CCGAGTACAC GCGCCTGGTG
GCGGATGCGC CGGGGGTGGT GACGTCGGTT GACGCCGAGC CCGGCCAGGT GGTGTCTGCG
GGCACGCCGG TGGTGCGCAT TGCTCGCGAC GGCCCGCGCG ACGCGGTGTT CTCGGTGCCG
GAGGACAAGG TGGGCCAGTT GCGCGCAGGG CAGGCCGTGC AGGTGCGCGC CTGGTCGGGC
GACGCGCTGC TGCAGGGCCG GGTGCGCGAG GTGGCGGCCA GCGCCGATCC GGTGACGCGC
ACCTTCCTCG TGAAAGTGGC GGTGGAGGGC GCGGACGTGC CGCCGCTGGG CGCCACCGTG
TATGTGGCGC CGCAGGTGCT GGCGCGGGGC GGCGTGCAGG CGATCAAGCT GCCCACCAGC
GCCCTGCGCC AGGAGGGCGG CCAGACGGTG GTGTGGGTCT ATGAGGCCAA GAACGGCAGT
GCCACCGGCA CCGTGCGCCT GCAGCCGGTG CAGATCGCCA CGGCCGACGG CAACGAGGCC
GTGATCGCCG CCGGCCTCAC CCCCGGCATG CAGGTGGTGG CCACGGGCGT GCATGTGCTG
CCCCGGGGCA GGTGGTGA
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| Protein sequence | MTHPVAQRAA GLPGPSSLQP RRGVFLWPPR GGVAGAALVL AVAALALAGC SRREPAPEPV
RAVKLLTVGV APLQMRLEYA GEVRARVESR LGFRVAGKIV QRQAELGQRV QAGQVLAQLD
PRDYELAAQA ARAQVASATT QRDLAAADFE RFSKLRAQNF ISGAELDRRQ AQLKAAQASL
DQARAQLASQ GNQTEYTRLV ADAPGVVTSV DAEPGQVVSA GTPVVRIARD GPRDAVFSVP
EDKVGQLRAG QAVQVRAWSG DALLQGRVRE VAASADPVTR TFLVKVAVEG ADVPPLGATV
YVAPQVLARG GVQAIKLPTS ALRQEGGQTV VWVYEAKNGS ATGTVRLQPV QIATADGNEA
VIAAGLTPGM QVVATGVHVL PRGRW
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