Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1200 |
Symbol | |
ID | 4672519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1270389 |
End bp | 1271678 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639838322 |
Product | putative ribonuclease BN |
Protein accession | YP_985508 |
Protein GI | 121593612 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.530131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.510939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTGT CCCTACAGTC CATTGCAGTG CGTGCCGAGG AGTGGCTGGT GGAGCTTTCC CACTTCCCCT GGCGCACCAC CGCGCAGACG CTGCGCGAGC GCTTTCGCGA GGACCGCCTG GGGCTGACGG CCAGCAGCCT CACCTTCACC ACGCTGCTGT CGCTGGTGCC GTTCGTGACG GTGGCGCTGG CCATGTTCAC CGTGTTCCCC ATGTTTGCCG AGATGCAGCT CGTGCTGCAG CGCTGGCTGG TGGACAGCCT GGTGCCCGAC AGCATCTCGC GCCCGGTGCT GGGCTACCTC ACACAGTTCG CCGCCAAGGC GCATGGCCTG GGCGCGGCGG GCTTGTCTAT CCTCATGGTG ACCGCGCTGG CGCTGATCCT CACCATCGAT CGCACGCTCA ACAACATCTG GCGCGTGCAG CGCCTGCGCC CGCTGGGCCA GCGCGTGCTG ATCTACTGGG CCGCGCTCAC GCTCGGTCCG CTGGTGCTGG CGGCCAGCCT GGCGCTGACC ACCTCGGTCG CCAGCGCCGC GTCGCGCGGT ATCGGCGACA CGCTGCCGGG CGGAGCGCGC CTGCTGTTCG ATGCGATCGA GTTCTTCGTG CTGGCCGCCG GCATGGCGGC GCTGTACCGC TATGTGCCCA ACACCCAGGT GCACTGGCGC CACGCCTGGG CGGGCGGGGT GTTCGTCGCC GTTGGCATTG AGCTGGCCAA GAAAGTCCTG TCGCTGTACC TGGCGTCGGT ACCCACCTAT TCGGTGCTGT ACGGCACGTT CGCCACGCTG CCCATCTTGC TGCTGTGGGT GTACGTGGCC TGGGTGATCG TGCTGCTGGG TGCGGTGGTG GCCGCCTATC TGCCGAGCCT GCTCGCCGGC GTGGCGCGCT GCGCCACGGG CGAGGGCTGG GCCTTCTTGC TGGCCGTGGA GGTGCTGCAG CAGCTGCACC GCGCGCGCCA GCAACCGCCC CACGGGCTGA GCGTGCTGGA GCTGGCCCAG CGGCTGCGCG TGGATGTGCT GCAGGTGGGG TCCGTGCTGC CGGTGCTGGC GGCGCTGGAT TGGGTGGTGC GGGTGGACGA GACGGCCGCC GACGGGTCCG ACGCAGCCGA CGCACGCTAC GTGCTGCTGG CCGAGCCAGC CACCACGCAC ATGGAACCGC TGGTGCAGCG CCTGCTGCTG GCGCGCACCC CGCCGCTGGA GCGCCTGTGG GCGCACACGG GGCTGGAGGT GCTCACGCTG GCCGACGTGC TGCCGCGCGA ATCCGCGCAG CGGCCGCCTG AGATGCTCCT TAAACGATAG
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Protein sequence | MSLSLQSIAV RAEEWLVELS HFPWRTTAQT LRERFREDRL GLTASSLTFT TLLSLVPFVT VALAMFTVFP MFAEMQLVLQ RWLVDSLVPD SISRPVLGYL TQFAAKAHGL GAAGLSILMV TALALILTID RTLNNIWRVQ RLRPLGQRVL IYWAALTLGP LVLAASLALT TSVASAASRG IGDTLPGGAR LLFDAIEFFV LAAGMAALYR YVPNTQVHWR HAWAGGVFVA VGIELAKKVL SLYLASVPTY SVLYGTFATL PILLLWVYVA WVIVLLGAVV AAYLPSLLAG VARCATGEGW AFLLAVEVLQ QLHRARQQPP HGLSVLELAQ RLRVDVLQVG SVLPVLAALD WVVRVDETAA DGSDAADARY VLLAEPATTH MEPLVQRLLL ARTPPLERLW AHTGLEVLTL ADVLPRESAQ RPPEMLLKR
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