Gene Ajs_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1200 
Symbol 
ID4672519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1270389 
End bp1271678 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content70% 
IMG OID639838322 
Productputative ribonuclease BN 
Protein accessionYP_985508 
Protein GI121593612 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.530131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.510939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTGT CCCTACAGTC CATTGCAGTG CGTGCCGAGG AGTGGCTGGT GGAGCTTTCC 
CACTTCCCCT GGCGCACCAC CGCGCAGACG CTGCGCGAGC GCTTTCGCGA GGACCGCCTG
GGGCTGACGG CCAGCAGCCT CACCTTCACC ACGCTGCTGT CGCTGGTGCC GTTCGTGACG
GTGGCGCTGG CCATGTTCAC CGTGTTCCCC ATGTTTGCCG AGATGCAGCT CGTGCTGCAG
CGCTGGCTGG TGGACAGCCT GGTGCCCGAC AGCATCTCGC GCCCGGTGCT GGGCTACCTC
ACACAGTTCG CCGCCAAGGC GCATGGCCTG GGCGCGGCGG GCTTGTCTAT CCTCATGGTG
ACCGCGCTGG CGCTGATCCT CACCATCGAT CGCACGCTCA ACAACATCTG GCGCGTGCAG
CGCCTGCGCC CGCTGGGCCA GCGCGTGCTG ATCTACTGGG CCGCGCTCAC GCTCGGTCCG
CTGGTGCTGG CGGCCAGCCT GGCGCTGACC ACCTCGGTCG CCAGCGCCGC GTCGCGCGGT
ATCGGCGACA CGCTGCCGGG CGGAGCGCGC CTGCTGTTCG ATGCGATCGA GTTCTTCGTG
CTGGCCGCCG GCATGGCGGC GCTGTACCGC TATGTGCCCA ACACCCAGGT GCACTGGCGC
CACGCCTGGG CGGGCGGGGT GTTCGTCGCC GTTGGCATTG AGCTGGCCAA GAAAGTCCTG
TCGCTGTACC TGGCGTCGGT ACCCACCTAT TCGGTGCTGT ACGGCACGTT CGCCACGCTG
CCCATCTTGC TGCTGTGGGT GTACGTGGCC TGGGTGATCG TGCTGCTGGG TGCGGTGGTG
GCCGCCTATC TGCCGAGCCT GCTCGCCGGC GTGGCGCGCT GCGCCACGGG CGAGGGCTGG
GCCTTCTTGC TGGCCGTGGA GGTGCTGCAG CAGCTGCACC GCGCGCGCCA GCAACCGCCC
CACGGGCTGA GCGTGCTGGA GCTGGCCCAG CGGCTGCGCG TGGATGTGCT GCAGGTGGGG
TCCGTGCTGC CGGTGCTGGC GGCGCTGGAT TGGGTGGTGC GGGTGGACGA GACGGCCGCC
GACGGGTCCG ACGCAGCCGA CGCACGCTAC GTGCTGCTGG CCGAGCCAGC CACCACGCAC
ATGGAACCGC TGGTGCAGCG CCTGCTGCTG GCGCGCACCC CGCCGCTGGA GCGCCTGTGG
GCGCACACGG GGCTGGAGGT GCTCACGCTG GCCGACGTGC TGCCGCGCGA ATCCGCGCAG
CGGCCGCCTG AGATGCTCCT TAAACGATAG
 
Protein sequence
MSLSLQSIAV RAEEWLVELS HFPWRTTAQT LRERFREDRL GLTASSLTFT TLLSLVPFVT 
VALAMFTVFP MFAEMQLVLQ RWLVDSLVPD SISRPVLGYL TQFAAKAHGL GAAGLSILMV
TALALILTID RTLNNIWRVQ RLRPLGQRVL IYWAALTLGP LVLAASLALT TSVASAASRG
IGDTLPGGAR LLFDAIEFFV LAAGMAALYR YVPNTQVHWR HAWAGGVFVA VGIELAKKVL
SLYLASVPTY SVLYGTFATL PILLLWVYVA WVIVLLGAVV AAYLPSLLAG VARCATGEGW
AFLLAVEVLQ QLHRARQQPP HGLSVLELAQ RLRVDVLQVG SVLPVLAALD WVVRVDETAA
DGSDAADARY VLLAEPATTH MEPLVQRLLL ARTPPLERLW AHTGLEVLTL ADVLPRESAQ
RPPEMLLKR