| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1197 |
|---|
| Symbol | thyA |
|---|
| ID | 4672547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1267599 |
|---|
| End bp | 1268432 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639838319 |
|---|
| Product | thymidylate synthase |
|---|
| Protein accession | YP_985505 |
|---|
| Protein GI | 121593609 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0207] Thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR03284] thymidylate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.489198 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCAC GCCCCATCCG CCACCAATAC GAAGACCTGA TGCGCCATGT GTTCGAACAT
GGCACGGCCA AGGGCGACCG CACGGGCACG GGCACCAAGA GCGTGTTCGG CCACCAGATG
CGCTTTGACC TCTCCGAGGG CTTTCCGCTG GTGACCACCA AGAAGGTGCA CCTCAAGAGC
ATCATCCTGG AGCTGCTGTG GTTCCTGCGC GGCGACAGCA ACGTGCGCTG GCTGCAGGAG
CGCGGCTGCA CCATCTGGGA CGAGTGGGCG CGCGACGACG GCAGCCTGGG CCCCGTGTAC
GGCGTGCAGT GGCGCAGCTG GCCCACGCCG GACGGCGGCC ACATCGACCA GATCCAGCAA
GTGATCGACA CCCTCAAGAC CCACCCCGAC AGCCGCCGCA TCATCGTGAG CGCCTGGAAC
GTGGCCGAGC TGGACCGGAT GGCGCTCATG CCCTGCCACG CATTCTTCCA GTTCTACGTG
GCGCCATCCC AGGTGGCTGG TGAGCCGGGC AAACTGAGCT GCCAGCTCTA CCAGCGCAGC
GCAGACATCT TCCTGGGCGT GCCGTTCAAC ATCGCGTCGT ACGCGCTGCT CACGCACATG
GTGGCGCAGC AGTGCGACCT GCAAGTGGGT GACTTCATCT GGACCGGCGG CGACTGCCAT
ATCTACAGCA ACCATTTCGA GCAGGTGCGG ACCCAACTGG CGCGCCAGCC CTATGCCTAC
CCGACGCTGC AGATCAAGCG CCGGCCCGCA TCCATCTTTG ATTACGCCTA CGAAGACTTC
GAAGTGGTGG GCTACGAACA CCACCCCGCC ATCAAGGCGC CGGTGGCGGT GTAG
|
|---|
| Protein sequence | MTPRPIRHQY EDLMRHVFEH GTAKGDRTGT GTKSVFGHQM RFDLSEGFPL VTTKKVHLKS
IILELLWFLR GDSNVRWLQE RGCTIWDEWA RDDGSLGPVY GVQWRSWPTP DGGHIDQIQQ
VIDTLKTHPD SRRIIVSAWN VAELDRMALM PCHAFFQFYV APSQVAGEPG KLSCQLYQRS
ADIFLGVPFN IASYALLTHM VAQQCDLQVG DFIWTGGDCH IYSNHFEQVR TQLARQPYAY
PTLQIKRRPA SIFDYAYEDF EVVGYEHHPA IKAPVAV
|
|---|
| |