| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1192 |
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| Symbol | |
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| ID | 4672541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1262811 |
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| End bp | 1264346 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639838314 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_985500 |
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| Protein GI | 121593604 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.616523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGA TCTGGATAGT AGACGACGAC CCTTCGATCC GCTTCGTCCT CGAAAAGGCC
CTGGCGCGCG AAAACCTGCC CACGCGCAGC TTCACGCAGG CGCGCGATGT ACTGGACGCG
CTGGCCGACG TGGCCGCGGG CGACCCCACC CACCAGGGAC CGCAGGTCCT GGTGAGCGAT
ATCCGCATGC CGGGCGGCTC CGGCCTGCAA CTGCTGGAGA AGGTGCGCGA CCTGCAACCC
GGTCTGCCGG TCATCGTGAT GACGGCGTAT TCCGACCTGG ACAGCGCCGT GTCCGCCTTC
CAAGGCGGCG CCTTCGAATA CCTGCCCAAG CCGTTCGACC TGCCCAAGGC GGTGGAGCTG
ATCCGCCGCG CCGTGGAGGA AAGCCAGCGC GAGGAGGTCG CCGAGCAGCA GCTCACCGCC
ATGCCCGAGA TGCTGGGCCA GGCACCCGCC ATGCAGGACG TGTTCCGCGC CATCGGCCGG
CTGAGCCAGA GCGTGGTCAC GGTGCTGATC ACGGGCGAAT CCGGCTCGGG CAAGGAACTC
GTGGCACGCG CGCTGCACAA GCACTCGCCC GTGGCGGGTG GGCCCTTCGT GGCCATCAAC
ACTGCGGCCA TCCCGAAGGA CCTGCTGGAG AGCGAGCTCT TCGGCCATGA GCGCGGCGCC
TTCACGGGCG CGCAGACGCA GCGGCGCGGG CGCTTCGAGC AGGCCGAGGG CGGCACGCTG
TTCCTCGACG AAATCGGCGA CATGCCCTTC GACCTGCAGA CGCGCCTGCT GCGCGTGCTG
TCGGACGGTC AGTTCTACCG CGTGGGCGGC CATGCCGCCG TGAAGGCCAA TGTGCGCGTG
ATCGCCGCCA CGCACCAGAA CCTGGAGCAG CGCGTGAAGG ACGGGGCCTT CCGCGAGGAC
CTGTTCCACC GCCTCAACGT GATCCGCCTG CGCCTGCCGG CGCTGCGCGA GCGCAGCGAG
GACGTGGCCA TGCTCACACG CTACTTTCTG CAGCGCAGCG CAAGGCAGCT GGGCGTGGAG
CCCAAGCGCA TCTCCGACGC GGCGCTGGCC CTGCTCACAC GCTTTGCCTT CCCCGGCAAC
GTGCGCCAGC TGGAGAACAT CTGCCACTGG CTGACGGTGA TGGCGCCCGC GCAGGTCATC
TCGGCGCAGG ACCTGCCGCC CGAGGTGCTG GAGGCCACGC CGCATCCCGC CGCGCCGTTG
CAGGGCGTGG CGGACGAGGT TGCCGCTGGC GCGACGAGCG CGTCGACCCC CGCGCTGCCG
CCTGCGCCGG CGGGCACGCG CACCGACCAG GCTGCGGCCC TGGATGGCAT GGGCTGGGAG
CCCGCGCTGG TGAGCGAGGC CCAGCAGTTG CTGCGCAGCG GCCAGGCCGA CGTGTGGGAC
GTGCTCACGC GGCGTTTCGA GTCGCGCCTG ATCCGCACGG CGCTGCAGGC CACGCACGGG
CGGCGTATGG AAGCGGCGCA GCGCCTGGGC ATCGGCCGCA ACACCATCAC GCGCAAGATC
CAGGAACTGG GCCTGGATGC GCACGATGAT GAGTGA
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| Protein sequence | MKPIWIVDDD PSIRFVLEKA LARENLPTRS FTQARDVLDA LADVAAGDPT HQGPQVLVSD
IRMPGGSGLQ LLEKVRDLQP GLPVIVMTAY SDLDSAVSAF QGGAFEYLPK PFDLPKAVEL
IRRAVEESQR EEVAEQQLTA MPEMLGQAPA MQDVFRAIGR LSQSVVTVLI TGESGSGKEL
VARALHKHSP VAGGPFVAIN TAAIPKDLLE SELFGHERGA FTGAQTQRRG RFEQAEGGTL
FLDEIGDMPF DLQTRLLRVL SDGQFYRVGG HAAVKANVRV IAATHQNLEQ RVKDGAFRED
LFHRLNVIRL RLPALRERSE DVAMLTRYFL QRSARQLGVE PKRISDAALA LLTRFAFPGN
VRQLENICHW LTVMAPAQVI SAQDLPPEVL EATPHPAAPL QGVADEVAAG ATSASTPALP
PAPAGTRTDQ AAALDGMGWE PALVSEAQQL LRSGQADVWD VLTRRFESRL IRTALQATHG
RRMEAAQRLG IGRNTITRKI QELGLDAHDD E
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