Gene Ajs_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1186 
Symbol 
ID4672569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1256638 
End bp1257636 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content65% 
IMG OID639838308 
Producthypothetical protein 
Protein accessionYP_985494 
Protein GI121593598 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.502028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGGC TGACCTATTT ATTCGATACC GCGCAGCAAT GGCTGTTCGA GACGCTGGTA 
CAGCCCGCGC TCTTCATGCT GGGCCAGGCC AATGTGCTGG AGGACGGTTA TGCCGCCACC
GGGTGGCTGC TGGTGGGACT GCTGCAACTG GGGGTGATGG TCGCGGTGAT CGGGCCTTTG
GAGCGTTGGC GCCCGGTGGA GCCGTTGCGC GACCGTGGTG CCGTGCACGT GGACATGCTT
TACACGCTGA TCCATCGCCT GGGTCTTTTT CGCCTGGCAC TGTTCTTCAC CACGGAGCCT
CTGTGGAATG CACTGTTTGG CGCCCTGCGC GCCCATGGCT GGAAGACCCT GCAGCTTGAT
GCGCTCTGGC CGGGTGTCTC CGACTTGCCC GTCGTGAGCC TGCTGCTGTA CCTGCTGGTG
TTCGACTTCG TGGACTATGG GATCCACCGC GGCCAGCACC GCTTTGAATG GTGGTGGAGG
CTGCATGCGC TCCACCATTC GCAGCGGCAG ATGACGATGT GGAGCGACAA CCGCAACCAT
CTGCTGGACG ATCTGCTGCG CGATGCCATC ATCGTGTTCG TCGCGCAGTG CATCGGTGTG
GCGCCGGGGC AGTTTGTCGC CATCGTGGCC CTCACGCAGC TCAGCGAGAA CCTGCACCAC
GCCAACCTGC GCCTGTGGTT CGGCCAGGTG GGCGAGCGCC TGTGGGTCAG CCCGCGTTTC
CACCGCATGC ACCACGCCAT GAGCGTGGGC CCTGAAGCTG CACCTGGGCA GGGAACCGAT
CAGCACCTGC ATGCGGCAGT GCCCGGGGGC AACAACTTCG GCGTGTTGTT GCCGTGGTGG
GACATGTTGT TCGGTACGGC CAACTTCGAG CATCGCTACG AGCCCACGGG CGTGCGCGAC
CAGGTGGAGG CGGACGCGGA CGGCCGCGTG CGTGATTACG GGCGGGGGTT CTGGGCGCAG
CAGTGGCGCG GCCTGCTGCG GCTGGTGGGG CGGGCGTAG
 
Protein sequence
MSGLTYLFDT AQQWLFETLV QPALFMLGQA NVLEDGYAAT GWLLVGLLQL GVMVAVIGPL 
ERWRPVEPLR DRGAVHVDML YTLIHRLGLF RLALFFTTEP LWNALFGALR AHGWKTLQLD
ALWPGVSDLP VVSLLLYLLV FDFVDYGIHR GQHRFEWWWR LHALHHSQRQ MTMWSDNRNH
LLDDLLRDAI IVFVAQCIGV APGQFVAIVA LTQLSENLHH ANLRLWFGQV GERLWVSPRF
HRMHHAMSVG PEAAPGQGTD QHLHAAVPGG NNFGVLLPWW DMLFGTANFE HRYEPTGVRD
QVEADADGRV RDYGRGFWAQ QWRGLLRLVG RA