Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1186 |
Symbol | |
ID | 4672569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1256638 |
End bp | 1257636 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639838308 |
Product | hypothetical protein |
Protein accession | YP_985494 |
Protein GI | 121593598 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.502028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGGGC TGACCTATTT ATTCGATACC GCGCAGCAAT GGCTGTTCGA GACGCTGGTA CAGCCCGCGC TCTTCATGCT GGGCCAGGCC AATGTGCTGG AGGACGGTTA TGCCGCCACC GGGTGGCTGC TGGTGGGACT GCTGCAACTG GGGGTGATGG TCGCGGTGAT CGGGCCTTTG GAGCGTTGGC GCCCGGTGGA GCCGTTGCGC GACCGTGGTG CCGTGCACGT GGACATGCTT TACACGCTGA TCCATCGCCT GGGTCTTTTT CGCCTGGCAC TGTTCTTCAC CACGGAGCCT CTGTGGAATG CACTGTTTGG CGCCCTGCGC GCCCATGGCT GGAAGACCCT GCAGCTTGAT GCGCTCTGGC CGGGTGTCTC CGACTTGCCC GTCGTGAGCC TGCTGCTGTA CCTGCTGGTG TTCGACTTCG TGGACTATGG GATCCACCGC GGCCAGCACC GCTTTGAATG GTGGTGGAGG CTGCATGCGC TCCACCATTC GCAGCGGCAG ATGACGATGT GGAGCGACAA CCGCAACCAT CTGCTGGACG ATCTGCTGCG CGATGCCATC ATCGTGTTCG TCGCGCAGTG CATCGGTGTG GCGCCGGGGC AGTTTGTCGC CATCGTGGCC CTCACGCAGC TCAGCGAGAA CCTGCACCAC GCCAACCTGC GCCTGTGGTT CGGCCAGGTG GGCGAGCGCC TGTGGGTCAG CCCGCGTTTC CACCGCATGC ACCACGCCAT GAGCGTGGGC CCTGAAGCTG CACCTGGGCA GGGAACCGAT CAGCACCTGC ATGCGGCAGT GCCCGGGGGC AACAACTTCG GCGTGTTGTT GCCGTGGTGG GACATGTTGT TCGGTACGGC CAACTTCGAG CATCGCTACG AGCCCACGGG CGTGCGCGAC CAGGTGGAGG CGGACGCGGA CGGCCGCGTG CGTGATTACG GGCGGGGGTT CTGGGCGCAG CAGTGGCGCG GCCTGCTGCG GCTGGTGGGG CGGGCGTAG
|
Protein sequence | MSGLTYLFDT AQQWLFETLV QPALFMLGQA NVLEDGYAAT GWLLVGLLQL GVMVAVIGPL ERWRPVEPLR DRGAVHVDML YTLIHRLGLF RLALFFTTEP LWNALFGALR AHGWKTLQLD ALWPGVSDLP VVSLLLYLLV FDFVDYGIHR GQHRFEWWWR LHALHHSQRQ MTMWSDNRNH LLDDLLRDAI IVFVAQCIGV APGQFVAIVA LTQLSENLHH ANLRLWFGQV GERLWVSPRF HRMHHAMSVG PEAAPGQGTD QHLHAAVPGG NNFGVLLPWW DMLFGTANFE HRYEPTGVRD QVEADADGRV RDYGRGFWAQ QWRGLLRLVG RA
|
| |