| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1185 |
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| Symbol | |
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| ID | 4672568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1255748 |
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| End bp | 1256587 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639838307 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_985493 |
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| Protein GI | 121593597 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.471915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCG CTGAGCCACG CGGCGGCCGC TCCCCCAGAG CACGGCGGAG GTGGCATATT
TGTTGTGCTT CAATTTTGAT AGCTGCTGGC GCTTATCCAG CAAGCGCTAT AGGCCAAAAT
GACTGCAAAG GCGCGGTGTA CCTGACTTTT GACACTGGCC ACATGGGCGT TGCGCATCTG
GTGGCCGAGG TGCTGCAGCG CCAGCAGGTC AAGGCGACCT TCTTTGCCGC AGACGAACCG
ACTCAGACGG GCGGCAGCAG CCTGGATGGC TACTGGGCGC CCTGGTGGCG CGCGCGCGCT
GCAGAAGGGC ACGAGTTCGC ATCGCACACG CTGCACCATG TGTACTGGCG TGCCGACCAG
GGGACGCCGC TGCAGCCGCG GTTCAAGGTC AGGCCATCGG CCGGTCCTCA GGCAGGTCAG
GACCTGACGA TGACGGGCGC GCAATACTGC GCACAGATCG ATGGCGCTGC GAGCCGGTTG
CGTGTCCTGA CGGGCCGGGA GCCGCTCCCG CTATTCCGCG CGCCGGGCGG CAAGACCTCT
CAGCGCCTGC TGGAGGCTGC CAAGTCCTGC GGTTATACGC ATGTGGGATG GAGTGCTGCA
GGGTTCCTCG GGGACGAGCT GCCCAGCGAC CACTACAGCA ATACGGCCCT GCTGGAGCGT
GCGTTGCGCA CCGTTCGTGA CGGCGACATC CTGCTGGCGC ATCTGGGCAT CTGGTCTCGC
AAGGATCCAT GGGCACCCGC TGTGCTGGAA CCTCTCGTCA AAGGCCTGAA GGCGCGGGGC
ATGTGCTTTC GCACGCTGCG CGAGCATCCT GTGTACGGAG CACAAGCGCA GAGAAAATGA
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| Protein sequence | MPSAEPRGGR SPRARRRWHI CCASILIAAG AYPASAIGQN DCKGAVYLTF DTGHMGVAHL
VAEVLQRQQV KATFFAADEP TQTGGSSLDG YWAPWWRARA AEGHEFASHT LHHVYWRADQ
GTPLQPRFKV RPSAGPQAGQ DLTMTGAQYC AQIDGAASRL RVLTGREPLP LFRAPGGKTS
QRLLEAAKSC GYTHVGWSAA GFLGDELPSD HYSNTALLER ALRTVRDGDI LLAHLGIWSR
KDPWAPAVLE PLVKGLKARG MCFRTLREHP VYGAQAQRK
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