| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1183 |
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| Symbol | |
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| ID | 4672596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1253890 |
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| End bp | 1254627 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639838305 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_985491 |
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| Protein GI | 121593595 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.471915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTC AGGACATTCT CTATTCGCAA GGATTCGGCA CGCGCCGCAT TTGCGCCGGC
TTGATTCAGC AGGGCAGAGT TGCCATTCAT GCGACAGGCA CCCTAGAGCC CACGATCTGC
CAAGACGCGA CGCAGGATAT TGATGTCGAA GGTTTGGTGT TGCGCGTTCA AGGAGTGGAT
TGGCCATACC AACCCAGGGC CTATGTCATG CTCCATAAGC CTGCAGGAAC CGAGTGTTCG
CAAAAGCCAT CGGCCTATCC CAGCATCTAC ACGTTGTTGC CCGCTCCGCT TAGGCAGAGG
CCCAGCAAGG GTTCTGTAGA TGGTGTGCAG GCCGTGGGGC GCTTGGACCA GGACACCACC
GGTTTGCTGT TACTCAGTGA CGATGGGCAA TTCATCCACC GCATGAGTTC GCCCAAAAAG
CATGTGCCAA AGGTATACCG TGTGACTGCT AAGCATCCCG TGACCAAGGA ACAGATCGAC
CGCTTGCTGG AAGGTGTGGT GCTCGATGAT GACCCACGCC CTGTGCGGGC GGCTGCCTGC
GCGCTAGTTG ACGCGCATGT TCTTGACCTG ACCCTGACGG AAGGGAAGTA CCACCAAGTG
AAGCGCATGA TTGCCGCGGT AGGCAATCGG GTGGAAGCCT TGCATCGGTC GCATATCGGC
CGTTTGGCAT TGCCGGCGGA TATGCAGCCG GGGGAGTGGC GTTGGCTCGG CGAAGAGGAA
CTCGCCCTGC TGCGGTAG
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| Protein sequence | MQLQDILYSQ GFGTRRICAG LIQQGRVAIH ATGTLEPTIC QDATQDIDVE GLVLRVQGVD
WPYQPRAYVM LHKPAGTECS QKPSAYPSIY TLLPAPLRQR PSKGSVDGVQ AVGRLDQDTT
GLLLLSDDGQ FIHRMSSPKK HVPKVYRVTA KHPVTKEQID RLLEGVVLDD DPRPVRAAAC
ALVDAHVLDL TLTEGKYHQV KRMIAAVGNR VEALHRSHIG RLALPADMQP GEWRWLGEEE
LALLR
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