Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1177 |
Symbol | |
ID | 4672403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1242396 |
End bp | 1243751 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639838294 |
Product | HflK protein |
Protein accession | YP_985485 |
Protein GI | 121593589 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.621922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTTC TTAACCGGGC CTCTCGCTGG GCCGTGCTGC CTGAGCGTAT TCGGGGGATG TTCAATCTCA ACGATCCTCG TTGGGGCCGT GGGGACGATA AGGGCGAGGG TGGGCAGCGC CCTGATTCGG AGCGCCCTTC TCCGGATAAC TCACAGCGTC CACGTGGACG TGACCAGAAT CCTTCGGGAC AGCCGCCGGA CCTGGATGAG TTGTGGCGTG ATCTGAACCG CAAGCTGGGT GGGTTGTTTG GCGGCGGCGG GTCGCGTGGC CCCGCTTCTG GTGGCGGCAA TGGTGGTTTC CAGCCAGACA TGAAGAACGC GGGAGTTGGC GTGGGATTGA TCGCCGCCAT AGCGGTGCTG ATCTGGCTGG GCACTGGCTT TTTCATCGTG CAAGAAGGCC AGCAAGCGGT GATCACCCAG TTCGGCAAGT ACAAGAGCAC GGTCAACGCC GGCTTCAATT GGCGTCTGCC TTACCCCATT CAGCGCCATG AACTGGTGTT CGTGACCCAA ATCCGGTCTG CTGATGTGGG GCGGGATAGC GTCATCAAGA GCACGGGACT GCGTGAGTCC GCCATGCTGA CCGAAGACGA GAACATCGTC GAAATCAAGT TCGCAGTGCA ATATCGTTTG AATGACGCGC GTGCGTGGCT GTTCGAGAGC CGCAATCCGG CCGAAGCCGT GGTTCAGGCG GCAGAGACGG CGGTGCGCGA AGTCGTGGGC AAAATGCGCA TGGATACCGC CTTGGCGGAA GAGCGGGACC AGATTGCTCC GCGCGTGCGC AATCTGATGC AGACCATCCT GGACCGATAC AAGGTCGGCG TGGAAGTCGT TGGCATCAAC CTGCAGCAAG GGGGGGTGCG CCCTCCCGAG CAAGTACAGG CGGCTTTTGA TGACGTGCTC AAGGCGGGCC AGGAGCGGGA GCGCGCTAAG AATGAAGCCC AGGCTTATGC CAATGATGTG GTTCCGCGTG CCACGGGTAC GGCGTCCCGC TTGATTGAGG AGGCGGCAGC CTACAAGGCG CGCATCGTGG CGCAGGCGCA GGGTGACACA CAGCGCTTCA GCGCCGTCCT TGCTGAATAC CAGAAGGCAC CGCAGGTGAC GCGAGACCGC ATGTATCTGG AGAGCATGCA GCAGATTTAC GGCAATGTGA CCAAGGTACT GGTGGAGTCG CGGCAAGGAT CCAACTTGCT GTACCTGCCG TTGGACAAGA TCATGCAGAG CGTTTCACAG CAGACTTCGG CGGCTGCGGC GACCGATACG CCGCCAGCGA CAGTCCCTCC TGCCGCGACC TCTCAATTCC CCGGCGATTC TCGGTTGCGT GATGCCAACC GTTCGCGCGA ACGTGAGTCC CGATAG
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Protein sequence | MNLLNRASRW AVLPERIRGM FNLNDPRWGR GDDKGEGGQR PDSERPSPDN SQRPRGRDQN PSGQPPDLDE LWRDLNRKLG GLFGGGGSRG PASGGGNGGF QPDMKNAGVG VGLIAAIAVL IWLGTGFFIV QEGQQAVITQ FGKYKSTVNA GFNWRLPYPI QRHELVFVTQ IRSADVGRDS VIKSTGLRES AMLTEDENIV EIKFAVQYRL NDARAWLFES RNPAEAVVQA AETAVREVVG KMRMDTALAE ERDQIAPRVR NLMQTILDRY KVGVEVVGIN LQQGGVRPPE QVQAAFDDVL KAGQERERAK NEAQAYANDV VPRATGTASR LIEEAAAYKA RIVAQAQGDT QRFSAVLAEY QKAPQVTRDR MYLESMQQIY GNVTKVLVES RQGSNLLYLP LDKIMQSVSQ QTSAAAATDT PPATVPPAAT SQFPGDSRLR DANRSRERES R
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