Gene Ajs_1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1177 
Symbol 
ID4672403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1242396 
End bp1243751 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content61% 
IMG OID639838294 
ProductHflK protein 
Protein accessionYP_985485 
Protein GI121593589 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.621922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTTC TTAACCGGGC CTCTCGCTGG GCCGTGCTGC CTGAGCGTAT TCGGGGGATG 
TTCAATCTCA ACGATCCTCG TTGGGGCCGT GGGGACGATA AGGGCGAGGG TGGGCAGCGC
CCTGATTCGG AGCGCCCTTC TCCGGATAAC TCACAGCGTC CACGTGGACG TGACCAGAAT
CCTTCGGGAC AGCCGCCGGA CCTGGATGAG TTGTGGCGTG ATCTGAACCG CAAGCTGGGT
GGGTTGTTTG GCGGCGGCGG GTCGCGTGGC CCCGCTTCTG GTGGCGGCAA TGGTGGTTTC
CAGCCAGACA TGAAGAACGC GGGAGTTGGC GTGGGATTGA TCGCCGCCAT AGCGGTGCTG
ATCTGGCTGG GCACTGGCTT TTTCATCGTG CAAGAAGGCC AGCAAGCGGT GATCACCCAG
TTCGGCAAGT ACAAGAGCAC GGTCAACGCC GGCTTCAATT GGCGTCTGCC TTACCCCATT
CAGCGCCATG AACTGGTGTT CGTGACCCAA ATCCGGTCTG CTGATGTGGG GCGGGATAGC
GTCATCAAGA GCACGGGACT GCGTGAGTCC GCCATGCTGA CCGAAGACGA GAACATCGTC
GAAATCAAGT TCGCAGTGCA ATATCGTTTG AATGACGCGC GTGCGTGGCT GTTCGAGAGC
CGCAATCCGG CCGAAGCCGT GGTTCAGGCG GCAGAGACGG CGGTGCGCGA AGTCGTGGGC
AAAATGCGCA TGGATACCGC CTTGGCGGAA GAGCGGGACC AGATTGCTCC GCGCGTGCGC
AATCTGATGC AGACCATCCT GGACCGATAC AAGGTCGGCG TGGAAGTCGT TGGCATCAAC
CTGCAGCAAG GGGGGGTGCG CCCTCCCGAG CAAGTACAGG CGGCTTTTGA TGACGTGCTC
AAGGCGGGCC AGGAGCGGGA GCGCGCTAAG AATGAAGCCC AGGCTTATGC CAATGATGTG
GTTCCGCGTG CCACGGGTAC GGCGTCCCGC TTGATTGAGG AGGCGGCAGC CTACAAGGCG
CGCATCGTGG CGCAGGCGCA GGGTGACACA CAGCGCTTCA GCGCCGTCCT TGCTGAATAC
CAGAAGGCAC CGCAGGTGAC GCGAGACCGC ATGTATCTGG AGAGCATGCA GCAGATTTAC
GGCAATGTGA CCAAGGTACT GGTGGAGTCG CGGCAAGGAT CCAACTTGCT GTACCTGCCG
TTGGACAAGA TCATGCAGAG CGTTTCACAG CAGACTTCGG CGGCTGCGGC GACCGATACG
CCGCCAGCGA CAGTCCCTCC TGCCGCGACC TCTCAATTCC CCGGCGATTC TCGGTTGCGT
GATGCCAACC GTTCGCGCGA ACGTGAGTCC CGATAG
 
Protein sequence
MNLLNRASRW AVLPERIRGM FNLNDPRWGR GDDKGEGGQR PDSERPSPDN SQRPRGRDQN 
PSGQPPDLDE LWRDLNRKLG GLFGGGGSRG PASGGGNGGF QPDMKNAGVG VGLIAAIAVL
IWLGTGFFIV QEGQQAVITQ FGKYKSTVNA GFNWRLPYPI QRHELVFVTQ IRSADVGRDS
VIKSTGLRES AMLTEDENIV EIKFAVQYRL NDARAWLFES RNPAEAVVQA AETAVREVVG
KMRMDTALAE ERDQIAPRVR NLMQTILDRY KVGVEVVGIN LQQGGVRPPE QVQAAFDDVL
KAGQERERAK NEAQAYANDV VPRATGTASR LIEEAAAYKA RIVAQAQGDT QRFSAVLAEY
QKAPQVTRDR MYLESMQQIY GNVTKVLVES RQGSNLLYLP LDKIMQSVSQ QTSAAAATDT
PPATVPPAAT SQFPGDSRLR DANRSRERES R