| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1170 |
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| Symbol | ispG |
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| ID | 4672307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1234907 |
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| End bp | 1236184 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639838287 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_985478 |
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| Protein GI | 121593582 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.851658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCT CCGGCACAGC CGCACCGATC GCTATGGCAC AGCCGCAGGC ACGCCGCTCG
CGGCAGGCAC GCATCGTCTG GGGCAGCCGG GTGGTCACGG TGGGTGGCGG CGCACCGGTG
CGGGTGCAGT CCATGACCAA CACCGACACG GTGGATGCGA TCGGCACGGC CATCCAGATC
AAGGAACTGG CGCAAGCGGG CTCTGAGTTC GTTCGCATCA CGGTGAACAC GCCGGAGGCC
GCAGCGGCCG TGCCCTACAT CCGTGAGCAG CTGGACCGCA TGGGCGAGAC GGTGCCGCTG
GTGGGCGACT TTCACTACAA CGGCCACCGC CTGCTGACGG AATTTCCCGA CTGCGCACAG
GCATTGTCCA AGTACCGCAT CAACCCGGGC AACGTGGGCA AGGGCGACAA GAAGGACAAG
CAGTTCGGCC AGATGATCGA GGCCGCGGTG CGCTGGGACA AGGCCGTGCG CATCGGCGTG
AACTGGGGCA GCCTGGACCA GGAGTTGCTG GCCGAGCTGA TGGATGCGAA CAGCCGCCGC
ACCCAGCCGT GGGATGCGCG CCAGGTCATG TACGAGGCGC TGATCACCTC CGCCATCGAA
TCGGCGAAAC GCGCCGAGGA AATGGGCCTG AGCGGCGACC AGATCATCCT TTCGTGCAAG
GTCAGCGGTG TGCAGGATCT GATCTCGGTG TACCGCGAAC TCGCGCGCCG CTGCGACTAT
GCGCTGCACC TGGGTCTGAC CGAGGCGGGC ATGGGTATCA AGGGTATCGT GGCGTCGACC
ACCGCGCTTT CGATCCTGCT GCAGGAAGGC ATTGGCGACA CTATCCGTGT GTCGCTGACT
CCGCAGCCCG GCGAGGCGCG CACCCAAGAG GTGGTGGTGG CCTCCGAGAT CCTGCAATCG
CTGGGACTGC GTGCGTTCGT GCCCAGCGTG ACCGCTTGCC CAGGCTGCGG CCGCACCACC
AGCACCACAT TCCAGGAGCT GGCCAAGCAG ATCGACGATT ACCTGCGTGC GCAGATGCCC
GTATGGCGGC TGCGCTATCC CGGCGTGGAA AAACTCAAGG TGGCCGTGAT GGGCTGCATC
GTCAACGGCC CGGGCGAGAG CAAACATGCC GACATCGGCA TCAGCCTTCC CGGCACGGGC
GAGGCGGCCG CCGCCCCGGT GTTCATCGAC GGCGAAAAGG CCATGACCCT GCGGGGCGAG
GGCATCGCGC GAGAGTTCCA GGATATTGTT GAAGGCTACA TTGCTCGGCG TTTCGGCAAC
GGCGCAGGCG CACAGTGA
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| Protein sequence | MNISGTAAPI AMAQPQARRS RQARIVWGSR VVTVGGGAPV RVQSMTNTDT VDAIGTAIQI
KELAQAGSEF VRITVNTPEA AAAVPYIREQ LDRMGETVPL VGDFHYNGHR LLTEFPDCAQ
ALSKYRINPG NVGKGDKKDK QFGQMIEAAV RWDKAVRIGV NWGSLDQELL AELMDANSRR
TQPWDARQVM YEALITSAIE SAKRAEEMGL SGDQIILSCK VSGVQDLISV YRELARRCDY
ALHLGLTEAG MGIKGIVAST TALSILLQEG IGDTIRVSLT PQPGEARTQE VVVASEILQS
LGLRAFVPSV TACPGCGRTT STTFQELAKQ IDDYLRAQMP VWRLRYPGVE KLKVAVMGCI
VNGPGESKHA DIGISLPGTG EAAAAPVFID GEKAMTLRGE GIAREFQDIV EGYIARRFGN
GAGAQ
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