| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1157 |
|---|
| Symbol | |
|---|
| ID | 4671860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1221339 |
|---|
| End bp | 1222943 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639838274 |
|---|
| Product | alkaline phosphatase |
|---|
| Protein accession | YP_985465 |
|---|
| Protein GI | 121593569 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0769586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGATGTC CCGTGCACCC GCCTTCGCTT GACATCTCGC GCCGCACACT GCTGCGTCAG
GCCGCCTGGG CCGGCATGGC CACGCAACTG CCCCGCTGGG CCTGGGCCCA GGCCGCCGTG
CGGCACGACC CCTTTGGCCT GGGTGTGGCC AGTGGCGACC CAGCGCACGA CGGCGTGGTC
CTCTGGACCC GCGTGCTGCC GCCCGCGGAC CTGGCCGGCG CCCACGCACC CTGGGCCGGC
CCCCTGACCG TACGCTGGGA ACTGGCCGAT GACGCGCAGT TTCGCCACAT CGTGCAGCGC
GGCACGGCGA TGGCGCTGCC TGAACTGGGC CACAGCGTGC ATGTAGAGGT GGCCGGCCTG
CGCCCCGACC GCTGGTACCA CTACCGCTTC ATGCTGGGTG ACGCCACCAG CCCCGTCGGC
CGCACGCGCA CCACACCCGC GCCGGATGCG CTGCCCGGGC GCCTGCGGCT GGTGTTCGCC
TCCTGCCAGC GGTGGGAGCA CGGCCACTAC GCGGCCTGGC GGCATGCCTG CGCGGACCAG
CCCGACTTGG TGCTGTTCCT GGGCGACTAC ATCTACGAAT ATCCCAGCCC ACAGGACGCC
ACGGGCTTGG CCCGCGTGCA CCCGCTGCGC CTGCCTCGCA ACCTGCAGGA CTACCGCGAC
CGCTACGCCC TGCACAAGAG CGACCCCGCC TTGCAGGCCG CGCACGCCTG CGCCCCGTGG
GCGGTGACCT GGGACGACCA CGAGGTACAG AACGATTACG CCGCTGGCCA GGGCCGGGGC
GAGCGCGCCG AATGGCTGCC GCTGCGCAGC GCCGCGTGGC AGGCCTTCTA TGAACACATG
CCGATGCGTG TATCCACGCT GGCCGGCTCC GGCTTCCATC AATTGCAGAT CCACCGCAGC
CTGCTCTGGG GGCGCCTGGC GCGGCTGCAC ATGCTGGACA CACGCCAGTA CCGCGACCTG
CAGGCCTGCC GCACGCCGGG CAAGGGCGCG ACCGGCGCGG TGCGGCCAGA CGCCTGCCCC
GAAATCCTGG ACGGCCACCG CAGCCTCCTC GGCTGGGAAC AGGAGCAGTG GCTGCACGCG
GGCTTGGCAG CCGATGCGCA CAACAAAACT ACGCGCTGGA GCGTACTGGC GCAGCAGACC
CTGTTCTCGC CACGCCGCTA TCCCTCGGGC CTGCAGTCCA CCGACAGCTG GGACGGCTAC
CCCGCCGCGC GCAACCGCCT GCTGCAGGCG CTGGCGCAGC ACCCGCCCCG CAACACGGTG
CTGCTGGGCG GCGACATCCA CCAGAACTAT GTTTGCAACG TGATGGCGCC ACACGGGCCG
CATGCCCACG GTGCGCCGCG CATCCTGGCC AGCGAGTTCT GCGGCACGTC GATCTCCTCG
CGCGCCGGCA CCACGCAGGA GAAGGTGGAT GCCATCGCGC GCCACAACCC CCATGTACTG
CTGGCCCGCT GTGAGGAGCG CGGCTACGGC CTGTGCGACA TCACGCCCAC GCGCTGGACC
ACCACGCTGC GCGCCCTGCG CGACCCGCTG GATGCCGGCA GCGCCGCGTA CACTCTGGCC
CGATTCGTGG TGGAAGACGG CCGCCCCGGC CCGCAGCCGG CCTAG
|
|---|
| Protein sequence | MRCPVHPPSL DISRRTLLRQ AAWAGMATQL PRWAWAQAAV RHDPFGLGVA SGDPAHDGVV
LWTRVLPPAD LAGAHAPWAG PLTVRWELAD DAQFRHIVQR GTAMALPELG HSVHVEVAGL
RPDRWYHYRF MLGDATSPVG RTRTTPAPDA LPGRLRLVFA SCQRWEHGHY AAWRHACADQ
PDLVLFLGDY IYEYPSPQDA TGLARVHPLR LPRNLQDYRD RYALHKSDPA LQAAHACAPW
AVTWDDHEVQ NDYAAGQGRG ERAEWLPLRS AAWQAFYEHM PMRVSTLAGS GFHQLQIHRS
LLWGRLARLH MLDTRQYRDL QACRTPGKGA TGAVRPDACP EILDGHRSLL GWEQEQWLHA
GLAADAHNKT TRWSVLAQQT LFSPRRYPSG LQSTDSWDGY PAARNRLLQA LAQHPPRNTV
LLGGDIHQNY VCNVMAPHGP HAHGAPRILA SEFCGTSISS RAGTTQEKVD AIARHNPHVL
LARCEERGYG LCDITPTRWT TTLRALRDPL DAGSAAYTLA RFVVEDGRPG PQPA
|
|---|
| |