Gene Ajs_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1150 
Symbol 
ID4671896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1212369 
End bp1213472 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content69% 
IMG OID639838268 
Producthistidine kinase internal region 
Protein accessionYP_985459 
Protein GI121593563 
COG category[T] Signal transduction mechanisms 
COG ID[COG2972] Predicted signal transduction protein with a C-terminal ATPase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA ACCACCCCAT CGCCTTCCTC TGCCGGCTGC TGACCACGGC GGCGTTCTGC 
TGCCTGGTGG CGCTGGGCGT CACACTGGCG AGATCCACGC CCTGGGATGC GAACCTGGTG
TATTCGCTCA CCATCGGCCT GGTGAGCTGG TTCACGGTGG ACCTGGGGCG CATGGCGCTC
ACACGCCACA GCGCCATTCC GTGGCCGCGG CGGCCATGGG GAGCAGTACT CATCTTTGCG
GGCACGGCCA TGGGCTTTGT CTCCGGCTCG GTGGTGGGAC ACCTGTACAA CGGCGGCGCA
CTGGGCGACC TGGCCTGGCT GCGCGGGCAC GAGGCCGTGT CCACCCTGGT CGTCACCATC
GCGGCCAGCG CATCCATCTC GTTTTTCTTC CACAGCCGGG GCAAGGCGCG CTTTCTGCAG
GCGCGCGTGG CCCAGGTACA GCGTGACGCG GCCGAGGCAC GCCTGAAACT GCTGGAAACG
CAGCTGGAGC CGCACATGAT GTTCAACACC CTGGCCAACC TGCGCGTGCT GGTGGCCACG
GATCCGCCGC GCGCCCAGGA GATGCTGGAC CACTTCATCG CCTACCTGCG CGCCACCCTG
GGCGCATCGC GCGCCGCGCT GCACCCATTG GCCGACGAGT TCGCGCGGCT GCAGGACTAC
CTGGCCCTCA TGGCCGTGCG CATGGGCCCG CGCCTGGACT ACACCCTGGA ACTGCCCGAG
GCTTTGCGCA ACGTGCCCGT CCCGCCCCTG CTGCAGCCGC TGGTGGAGAA CGCCATCCGC
CACGGCCTGG AGCCACAGGT GCAGGGTGGC CACATCCACG TACAGGCCGC GCTGCTGCAG
GGAGGCACCC CGGCGGCGCG CGTGCAGCTG GCCGTGCGTG ACACCGGCGC GGGCCTGTGC
GACACACCAC CCACGGGCAC CGCGGGCACG ACCACCGCGC GCTTTGGCCT GCAGCAGGTG
CGCGAGCGCC TCGCCACCCT GTACGGCGAC GCTGGCACTC TCGAATTGAT AGCTGCTAGC
GCACAGGGCA CGGCCTGCAT CATCACTTTT CCCTTGAAGC ACCATGCACT CGACGTTCCC
CCGAGCCCTG ATTGCCGAGG ATGA
 
Protein sequence
MSVNHPIAFL CRLLTTAAFC CLVALGVTLA RSTPWDANLV YSLTIGLVSW FTVDLGRMAL 
TRHSAIPWPR RPWGAVLIFA GTAMGFVSGS VVGHLYNGGA LGDLAWLRGH EAVSTLVVTI
AASASISFFF HSRGKARFLQ ARVAQVQRDA AEARLKLLET QLEPHMMFNT LANLRVLVAT
DPPRAQEMLD HFIAYLRATL GASRAALHPL ADEFARLQDY LALMAVRMGP RLDYTLELPE
ALRNVPVPPL LQPLVENAIR HGLEPQVQGG HIHVQAALLQ GGTPAARVQL AVRDTGAGLC
DTPPTGTAGT TTARFGLQQV RERLATLYGD AGTLELIAAS AQGTACIITF PLKHHALDVP
PSPDCRG