| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1147 |
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| Symbol | |
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| ID | 4671912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1209074 |
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| End bp | 1210336 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639838265 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_985456 |
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| Protein GI | 121593560 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.428295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACG CCCCCTCCGC CGCGCCGCTT CCACCCGCCC CCATCGCCAT GGCGCCGCGC
GCCGCCCTGC TGATGCTGGT GGCGCTGACC TCGGGCTTCG CATTGAGCTC GGCCTTTCGC
ACCGTGGCCG CCATCATGGC CGCGCCGCTG CAGGCGGACT TCGGGCTGTC GCCGCAAGCG
CTGGGGGTGT TCGCGGGCAC CTTTCATTTC GCCTTTGGCG CCATGCAGCT CTTCATGGGC
ATCGGCATCG ACCTGTATGG CGTGCGCCGC ACGATCCTGG CGGCGTTTCC GCTGTGTATC
GCGGGGGCGC TGCTGTCGGC GCTGGCGCCC GGTTACGGCG CGCTGCTGCT GGGCCAGGCG
CTGATCGGCG TGGGCTGCGC GCCGGCCTTC CTGGTGTGCA CGGTGTTCAT TGCACGGCAT
TTCGCGCCGC AGCGCTTCGC GGCGATGTCG GGCATGGCGA TGGCGCTGGG TACGCTGGGC
ATGCTGTTCA CCGGCACGCC TCTGGCCTGG CTGGTGCAGC AGTGGTCCTG GCGCGCGGGC
TTCGTGGTGC TGGCGGCGCT GGCGCTGGCG GCTTGGCTGT GGATCTGGCG CAGCGTGCAT
GAGCCCGTCG CCGCGCCGGC GCAGCAGGAG GCCCCGCGCG AGTCCGTGCG CGAGGCGGTG
CTGCGCTTCG CCGCGCTGTT CGCCGTGCCG CACACCTGGG GCATCGTGGT GCTGGGCGCG
GTGACCTATG CGGCGCTCAT CTCCCTGCGC GGCCTGTGGC TGGGGCCCAT GCTGATCGAG
CGCCACGGTT TCTCGCTGGT GCAAAGCGGC AACGTGGCGC TGGCCCTGTC GGTGGTGGCG
CTGTGCGGGC CGATGCTGTT CGGCCGCATC GACCCCGGCC CCGCCCGGCG CCGCCGCTGG
ATCGTGACCT GCACCCTGGC CATGGCGGTC CTGTTCGCGG CCATGGTGCT GCCGCACTCC
GCCCTGCTGG ACGTCGCCTG CATGCTGGCC GTGGGGCTGC TGTCAGGCTT CATCGTGCTG
CAGTACGCGG ACGTGCGCGC GGCCTACCCG GCGGCGCTCA CCGGGCGGGC CATGGCGGTG
TTCACCATGG CCATGTTCCT GGGTGTGGCG GCCATGCAGT GGCTCACGGG GCTGGTCGCG
TCCCTTGCCA AGCGCGGGGG GACGGACCCT TACCTGGCAG TGATGGCCAG CATCGCCGTG
CTGCTCGCGT TGGCGGCGCT GGCGTTTCGG CTGCTGCCGC ATCCGCCGCA GGGTGGAAGA
TAG
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| Protein sequence | MPNAPSAAPL PPAPIAMAPR AALLMLVALT SGFALSSAFR TVAAIMAAPL QADFGLSPQA
LGVFAGTFHF AFGAMQLFMG IGIDLYGVRR TILAAFPLCI AGALLSALAP GYGALLLGQA
LIGVGCAPAF LVCTVFIARH FAPQRFAAMS GMAMALGTLG MLFTGTPLAW LVQQWSWRAG
FVVLAALALA AWLWIWRSVH EPVAAPAQQE APRESVREAV LRFAALFAVP HTWGIVVLGA
VTYAALISLR GLWLGPMLIE RHGFSLVQSG NVALALSVVA LCGPMLFGRI DPGPARRRRW
IVTCTLAMAV LFAAMVLPHS ALLDVACMLA VGLLSGFIVL QYADVRAAYP AALTGRAMAV
FTMAMFLGVA AMQWLTGLVA SLAKRGGTDP YLAVMASIAV LLALAALAFR LLPHPPQGGR
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