| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1139 |
|---|
| Symbol | |
|---|
| ID | 4674364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1198631 |
|---|
| End bp | 1200571 |
|---|
| Gene Length | 1941 bp |
|---|
| Protein Length | 646 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639838257 |
|---|
| Product | nitrous-oxide reductase |
|---|
| Protein accession | YP_985448 |
|---|
| Protein GI | 121593552 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4263] Nitrous oxide reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.494075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA AGAGAGAGAG CCTGAACCCT GAAACCGTCG GCATGGGACG CCGCCGGTTC
ATCAATACCG CTGCTTTGGC GGGACTGACC GTGGGCGTTG CCGCGTGCAA CGACAAGCCC
GCAGCCGCCC CTGCAGCATC CGGCACCCCC GCGCCGGCAC CCGCCCCCGC TGCTGCCGCC
CACGCCGGCG CCAATGTGCA CCTCAAGCCC GGTGAGCTCG ATACCTACTA CGGTCTTTGG
AGCGGCGGCC ACAACGGCGA CGTTCGCGTG CTGGGCCTGC CCTCCGGTCG TGAACTTCTG
CGCATTCCCT GCTTCGTGCC TGACGCCCTC GTGGGCTGGG GCATCACCAA TGAATCCAAG
GCCGTGATGG GCACCAAGCC CGACGGCAGC CTGCGCTACA CCGTGGCGGA CACCCACCAC
TTGCACGGCT CGTACAAGGA CGGCAACTAC GACGGCCGTT ACGCCTGGGT CAACGACAAG
ATCAACAGCC GCATCGCGCG CATCCGCCTG GACTACTTCA TCTGCGACAA GATCACCGAG
CTGCCCAACG TGCAGGGCTT CCACGGCATC TTCCCCGACA AGCGCGATCC GGTCGATCCC
AACATCAACT ACACCACGCG CGTGTTCTGC GGCGCTGAAT TCGGCATTCC CCTGCCCAAC
GACGGCAAGG ATGTGAACGC CACCGAGAAG TACCGCTCGA TGTTCACCTG CGTGGACGCC
GAGACCATGG AAGTGCGCTG GCAGGTCCTG ATCGACGGCA ACTGCGACCT GACGGCCACG
TCGTTCGACG GCAAGCTGGC AGCGACCAAC CAGTACAACA CCGAGAACGG TGTGCACTAC
GAAGACATGA TGTCGGCCGA GCGCGACGCC TGCCTGTTCT TCAACATTGC CCGCATCGAA
GAAGCCGTGA AGGCCGGCAA GTTCAAGACC TACGGCACGT CCAAGGTGCC CGTGGTGGAC
GGCACCCGCG AAGCCAACAA GGATGCCAAG ACCGCTCTCA CCGCCTATGT GAGCGTTCCC
AAGAACCCGC ACGGCGTGAA CGCCAGCCCC GACCAGAAGT ACTTCATCTG CGCCGGCAAG
CTGTCGCCCA CGGCCACCGT GATCGAACTG GCCAAGGTGC TGGACTGGTT CGACGGCAAG
AGCGAGAAGC TCGACGACGC CATCGTCGCC GAGGTGGAAA TCGGCCTGGG CCCGCTGCAC
ACCGCCTTCG ACGGCCGCGG CAACGCCTAC ACCACGCTGT TCCTGGACAG CCAGATCGTC
AAGTGGAACA TCGACAAGGC CATCGCCTTC CACAAGGGTG ACAAGAACGC CACCTACGTC
GTGGACCGCC TGGACGTGCA CTACCAGCCT GGGCACATCA ATGCCACGCA CTCCGAGACC
GTGGCCGCTG ACGGCAAGTT CCTCGCCGTG GGTTGCAAGT TCTCCAAGGA CCGTTTCCTG
CCGGTGGGCC CCTTCCACCC CGAGAACGAG CAGTTGATCG ACATCTCGGG CGACAAGATG
GTGCTGCTGG CAGACCACCC GGTGCGCGGC GAGCCCCACG ACTTCATCAT CTTCAAGCGT
GACATCGTGA AGCCCAAGCA GGTCTACGAC CTGGACGAGT TCCCGCTGGC CGTCAAGGAC
GCCAAGGAAT CCGGCGTCTT CCGCAACGGC AAGAAGGTCA CGGTGAAGCT CACGTCGCAG
GCCCCTGCCT TCAGCCTGCG TGAATTCACC GTCAAGAAGG GCGATGAAGT CACGCTGATC
CTCACGAACC TCGACAAGAT CGAAGATTTG ACGCACGGCT TCGCGGTGCC CAAGTACAAC
ATCCAGTTCG TGATCAACCC GTTGGAGACG AAGTCGGTGA CCTTTATCGC CGACAAGCCC
GGTGTGTTCT GGGCTTACTG CTCCACGTTC TGCCATGCGC TGCACCTGGA AATGCGCACG
CGCATGATCG TCGAAGCCTG A
|
|---|
| Protein sequence | MSDKRESLNP ETVGMGRRRF INTAALAGLT VGVAACNDKP AAAPAASGTP APAPAPAAAA
HAGANVHLKP GELDTYYGLW SGGHNGDVRV LGLPSGRELL RIPCFVPDAL VGWGITNESK
AVMGTKPDGS LRYTVADTHH LHGSYKDGNY DGRYAWVNDK INSRIARIRL DYFICDKITE
LPNVQGFHGI FPDKRDPVDP NINYTTRVFC GAEFGIPLPN DGKDVNATEK YRSMFTCVDA
ETMEVRWQVL IDGNCDLTAT SFDGKLAATN QYNTENGVHY EDMMSAERDA CLFFNIARIE
EAVKAGKFKT YGTSKVPVVD GTREANKDAK TALTAYVSVP KNPHGVNASP DQKYFICAGK
LSPTATVIEL AKVLDWFDGK SEKLDDAIVA EVEIGLGPLH TAFDGRGNAY TTLFLDSQIV
KWNIDKAIAF HKGDKNATYV VDRLDVHYQP GHINATHSET VAADGKFLAV GCKFSKDRFL
PVGPFHPENE QLIDISGDKM VLLADHPVRG EPHDFIIFKR DIVKPKQVYD LDEFPLAVKD
AKESGVFRNG KKVTVKLTSQ APAFSLREFT VKKGDEVTLI LTNLDKIEDL THGFAVPKYN
IQFVINPLET KSVTFIADKP GVFWAYCSTF CHALHLEMRT RMIVEA
|
|---|
| |