Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1135 |
Symbol | |
ID | 4671815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1192897 |
End bp | 1193712 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639838253 |
Product | ABC-2 type transporter |
Protein accession | YP_985444 |
Protein GI | 121593548 |
COG category | [R] General function prediction only |
COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.014071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGA CCCAGATCTT CACCATCGCC GCCAAGGAAT TCCGCGATCG CATGCGCAAT CGCTGGGTGC TTGCGGTGGC CCTCGTCTTC ACCGTGTTCT CACTCGTCAT CGCCTACTTC GGCGGCGCGC AGCAGGGCAC GGTGGGCTTT CGCTCCATCG AGTTCACCAT CGCCAGCCTC GTCAGCCTGG TCATCTACCT CATCCCGCTG ATTGCGCTGT TGCTGGGGTT CGATGCCATC GTGGGCGAGC GCGAGCGCGG CTCACTCGAT CTGCTGCTGG CCCTGCCCAT TACCCGGCTG GAATTGCTGC TGGGCAAATA CCTGGGCTTG GCGGCTGCGC TGGCGCTCTC CACCCTGGCG GGCTTCGGGC TGGTGGCGGT GCTGCTGTGG CGCCACATGA GCGCCAATGC CCTGTTCCAC TACGGCGGCT TCATGATCAG CTCGGTATTG CTGGGCCTCG CATTCCTGAG CCTGGCAGTG ATGCTATCGG TGCTGGCACG CGACCGCACG CGCGCCTCGG GTCTGGCCAT CGCTACCTGG TTCTTCTTCG TGCTGGTGTT CGATTTGCTG CTGCTGGGCC TGCTGGTGGC CACGGGCGGG CAGTTCGCGG GCGATGCGTT CGCCTGGCTG CTGCTGCTGA ACCCGGCCGA CGTGTTCCGC ATTCTCAACG TGTTCTCGCT CGAAGACGTG CGCACGCTCT ACGGGCTCGC CAGCGTCGTT CCCTCGTCGC TGGGTAGCCC CGCAATCATG GGTGGCGTGA TGCTGGCGTG GATCGCTCTG CCGCTCGCCA TCGCCAACTG GAGATTCAAG CCATGA
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Protein sequence | MELTQIFTIA AKEFRDRMRN RWVLAVALVF TVFSLVIAYF GGAQQGTVGF RSIEFTIASL VSLVIYLIPL IALLLGFDAI VGERERGSLD LLLALPITRL ELLLGKYLGL AAALALSTLA GFGLVAVLLW RHMSANALFH YGGFMISSVL LGLAFLSLAV MLSVLARDRT RASGLAIATW FFFVLVFDLL LLGLLVATGG QFAGDAFAWL LLLNPADVFR ILNVFSLEDV RTLYGLASVV PSSLGSPAIM GGVMLAWIAL PLAIANWRFK P
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