| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1132 |
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| Symbol | |
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| ID | 4671779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1190125 |
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| End bp | 1191579 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639838250 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_985441 |
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| Protein GI | 121593545 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.716722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAC CCTATTCCAC TCTTGCGCTG GCCGAGCCGC TCAAGCGCGC CGTAGCCGAG
ATGGGCTACG AGAACATGAC GCCGATCCAG GCGCAGGCGA TCCCTGTCGT GCTGACCGGC
AAGGACGTGA TGGGTGCGGC GCAAACCGGC ACCGGCAAGA CGGCGGCTTT TTCGCTGCCG
TTGCTGCAGC GCCTGCTCAA GCACGAGAAC AGTTCAGCCT CTCCCGCGCG CCACCCTGTG
CGCGCGCTCG TGCTGCTGCC CACGCGCGAG CTGGCGGACC AGGTGGCGCA GCAGATCGCG
CTGTACGCCA AGTACACCAA GCTGCGCAGC ACGGTGGTGT TTGGCGGCAT GGACATGAAG
CCGCAGACCA TCGAGCTGAA AAAGGGCGTC GAGGTGCTGG TGGCCACGCC CGGCCGTCTG
CTGGACCATA TCGAGGCCAA GAACGCAGTG CTCAATCAGG TCGAGTACGT GGTGCTGGAC
GAGGCCGACC GCATGCTGGA CATTGGCTTC CTGCCCGACC TGCAGCGCAT CCTCTCCTAC
CTGCCCAAGC AGCGCACCAC GCTGCTGTTC TCCGCCACCT TCTCGCCAGA GATCAAGCGC
CTGGCCGGCA GCTATCTGCA GGACCCGATC ACCATCGAGG TCGCGCGCCC CAACGAGACC
GCCTCCACCG TGGAGCAGCG CTTCTTCGCG GTAGACGGCG ACGACAAGCG CCGCGCCATC
CGCCATGTGC TGAACGAGCG CGGCCTCAAG CAGGCCTTCA TCTTCGTGAA CAGCAAGCTG
GGCTGCGCGC GCTTGGCCCG CAGCCTGGAG CGCGACGGCC TCAAGACCGC CGCGCTGCAT
GGCGACAAGA GCCAGGACGA GCGACTGAAG GCGCTGGAAG CCTTCAAGAG CGGCGAGGTG
GACCTGCTGG TCTGCACCGA CGTGGCGGCG CGGGGCCTGG ACATCAAGGA CGTGCCCGCG
GTGTTCAACT ACGACGTGCC CTTCAATGCA GAGGACTACG TGCACCGCAT CGGCCGTACG
GGCCGCGCCG GCGCATCGGG TCTGGCCGTC ACGTTGGCGG CCAGCAGCGA TACCCGCCTG
GTGGCGGATA TCGAGAAGCT CATCAAGAAG AAGATCGAGC TGGAACCGCT GGAATTGCAG
GAAGATCGTC CGCGGGGCCG CTACAACGAC GGCCGCCGCG CCTCGGGCGG CGACGATTCG
GGCGAGGGCG CTCCAGCCGC TCCCCGCAGC CGCGAGCGCA GCGCGTACCG CTCCGCGCCT
GCGGCGTCTC GCGACCCGTT CTTCGACAAG CCCTACGAGG CCAGCACCTC GGCCGGTGCG
TCTGCGAGCT GGGAGGTGGC CCCCAAGGCA TCTCCCGCGC GTGGCGGCAT CTCCGCCAAC
ATCAAGCCCA AGCGCAAATT ACCCGCCTTG TTCAAGGCGC CGCAGGCCTC TACGGCCGAG
CCATCAACCC ACTGA
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| Protein sequence | MTQPYSTLAL AEPLKRAVAE MGYENMTPIQ AQAIPVVLTG KDVMGAAQTG TGKTAAFSLP
LLQRLLKHEN SSASPARHPV RALVLLPTRE LADQVAQQIA LYAKYTKLRS TVVFGGMDMK
PQTIELKKGV EVLVATPGRL LDHIEAKNAV LNQVEYVVLD EADRMLDIGF LPDLQRILSY
LPKQRTTLLF SATFSPEIKR LAGSYLQDPI TIEVARPNET ASTVEQRFFA VDGDDKRRAI
RHVLNERGLK QAFIFVNSKL GCARLARSLE RDGLKTAALH GDKSQDERLK ALEAFKSGEV
DLLVCTDVAA RGLDIKDVPA VFNYDVPFNA EDYVHRIGRT GRAGASGLAV TLAASSDTRL
VADIEKLIKK KIELEPLELQ EDRPRGRYND GRRASGGDDS GEGAPAAPRS RERSAYRSAP
AASRDPFFDK PYEASTSAGA SASWEVAPKA SPARGGISAN IKPKRKLPAL FKAPQASTAE
PSTH
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