| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1131 |
|---|
| Symbol | |
|---|
| ID | 4671768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1189146 |
|---|
| End bp | 1190009 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639838249 |
|---|
| Product | protein of unknown function, zinc metallopeptidase putative |
|---|
| Protein accession | YP_985440 |
|---|
| Protein GI | 121593544 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2321] Predicted metalloprotease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.273334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.63653 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATGGG AAGGCAATCG CGAATCGGAC AACGTGGAAG ACCGGCGCAG CGGCGGCGGG
GGCGGCTTCA TCGGCGGACG CTCGATCGGC ATTGGCACCA TCGTTGTGGC GCTCATCGGC
TGGGGTGTGT TTGGCATCAA CCCGCTGACC ACCATCGGCG TACTGTCGGG CGGGGGCGCG
CCGCAGGTCC AACAGGGGCC GGCCCAGCGT CCGCCGCAGG GCGACCGTGA GGCCGCCTTC
GTCTCCACCG TCCTAGCGTC CACGGAGGAT GTGTGGGCGC AGGTGTTCCA GCAAGGTGGG
GCGCAGTACC GCCAGCCCAA GTTGGTGCTC TACCGCGGCG CCACGCCCAC GGCCTGTGGC
ACGGGGCAGA GCGCGATGGG ACCGTTTTAC TGCCCCGGGG ACCAGAAGGT GTACCTGGAC
ATGGATTTCT TCGACACCAT GAGTCGCCAG CTGGGTGCGC CAGGCGAATT TGCCCGCGCC
TACGTGATCG CGCACGAGGT CGGCCACCAT GTGCAGACCC TGCTGGGCAC CACCGGCAAG
GTGGACGGCA TGCGCGGGCG CGTGAGCCAG CGCGAGCAGA ACGCGCTGTC GGTTCGGCTG
GAACTGCAGG CCGACTGTTA CGCCGGCATT TGGGCCCACC ATTCGCAACA GGCCAAGAAC
TGGCTGGAGC AGGGCGACAT CGAATCCGCG GTGAACGCCG CCGAGCAGAT CGGTGACGAC
GCGCTGCAGC GCCAGCAGAC CGGCACCGTG CGGCCCGATG CCTTCACCCA CGGCTCCAGC
GCGCAGCGCG TGCGGTGGTT CACGCAGGGG TTCAAGACCG GCAGTGTGCA AGGCTGCAAC
ACTTTCAATG CACAGTCGCT TTGA
|
|---|
| Protein sequence | MRWEGNRESD NVEDRRSGGG GGFIGGRSIG IGTIVVALIG WGVFGINPLT TIGVLSGGGA
PQVQQGPAQR PPQGDREAAF VSTVLASTED VWAQVFQQGG AQYRQPKLVL YRGATPTACG
TGQSAMGPFY CPGDQKVYLD MDFFDTMSRQ LGAPGEFARA YVIAHEVGHH VQTLLGTTGK
VDGMRGRVSQ REQNALSVRL ELQADCYAGI WAHHSQQAKN WLEQGDIESA VNAAEQIGDD
ALQRQQTGTV RPDAFTHGSS AQRVRWFTQG FKTGSVQGCN TFNAQSL
|
|---|
| |