| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1129 |
|---|
| Symbol | |
|---|
| ID | 4671716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1186724 |
|---|
| End bp | 1188007 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639838247 |
|---|
| Product | guanine deaminase |
|---|
| Protein accession | YP_985438 |
|---|
| Protein GI | 121593542 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | [TIGR02967] guanine deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.387393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.517294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTTT ACCGATCTGC GCTCCTGCGC TTTGCCGACG ACGGCACGGC CCTGTACGAA
GAAGACGGCC TGTTGGCCAC CGCGCCCGAT GACCGGGGCG TGCAGCGCGT GCACGCCGCC
GGCGCGTGGC GCGCGCTGGC GCCCCTTTAT TTTTCTCAGG CCTCGCAGCC GGTGACCCAC
TGGCCCGGCC GCATCATTGC ACCGGGCTTC GTGGACATGC ATGTGCACTA CCCGCAGCTG
GACGTGATCG GCTCGCCCGC CGAAGGCCTG CTGCCCTGGC TGGAGAACTA CACCTTCCCG
CACGAGTCGC GATTCGCCGA TGGCGGCTAC GCCGTCGGGG TAGCGGGCTT TTTCCTGGAT
GAGTTGCAGC GCAACGGCGT GACCACGGCG CTCACCTTCG CCACCTCGCA TCCGGGCTCG
GTGGATGCGC TGATGGCGCA GGCACATGCG CGGCGGCTGC GCCTGATTGC CGGCAAGGTG
CTGCAAGACC GCCACTCGCC CGACGGCGTG CGCGACGCGA CCGAGCAATC CCTCATTGAT
ACCGAAGCGC TCATCCAGCG CTGGCACGGC AAGGGGCGGC TAGGCTATGC GATCACGCCG
CGTTTTGCCC CCACCAGCAC GCCGCAGCAG CTGAGCGGCG CGGGTGCTCT GGCCGCGCGC
TACCCCGACG TATGGGTGCA GTCCCATGTG GCGGAGAACC AGCAGGAGAT CCGCTGGGCG
CAGGAGCTGT TCCCCGGCGC GCGCAGCTAC CTGGATGTGT ATGCCCGAGC CGGCCTGCTG
CGTGAGCGCG CGGTGTACGC GCATTGCATC CATTTTGACG ACGAGGACCG CGCCGCCATG
CGCGAGAGCG GCGCGGTGGC TGCCGTGTGC CCCACGAGCA ACCTGTTCCT GGGCAGTGGC
CAGTTTGACT TTGCGGGCGC GGACCGCATG GGCTTCGGCT ACGGCTTGGC CAGCGACGTG
GGCGGCGGCA CCAGCTTCAG CCCTTTTCAC ACGATGCTGG CCGCGTACTA CGTGGGCCGG
GAGGGGCAGA CCAAGACGGG ACTGAGCCTG GCGCCGCAAC GGCTGTGGTG GCTGCATACC
GCCGGCGCCG CGCGGGCGTT GGGGTTGGAT GGCGTGGTGG GCAACCTGCA GCCGGGTTGC
GAAGCCGACT TCGTGGTGCT GAATCCTGCA GCGACCCCGC TGCTCGCGCG GCGCACGGCG
GGCGCCGCCC ACCTGGACGA ACTGCTGTTC GCGATGATCG TGCTCGGCGA CGACCGTTTG
ATCGAGCGCA CAGTCATTGC ATGA
|
|---|
| Protein sequence | MHLYRSALLR FADDGTALYE EDGLLATAPD DRGVQRVHAA GAWRALAPLY FSQASQPVTH
WPGRIIAPGF VDMHVHYPQL DVIGSPAEGL LPWLENYTFP HESRFADGGY AVGVAGFFLD
ELQRNGVTTA LTFATSHPGS VDALMAQAHA RRLRLIAGKV LQDRHSPDGV RDATEQSLID
TEALIQRWHG KGRLGYAITP RFAPTSTPQQ LSGAGALAAR YPDVWVQSHV AENQQEIRWA
QELFPGARSY LDVYARAGLL RERAVYAHCI HFDDEDRAAM RESGAVAAVC PTSNLFLGSG
QFDFAGADRM GFGYGLASDV GGGTSFSPFH TMLAAYYVGR EGQTKTGLSL APQRLWWLHT
AGAARALGLD GVVGNLQPGC EADFVVLNPA ATPLLARRTA GAAHLDELLF AMIVLGDDRL
IERTVIA
|
|---|
| |