Gene Ajs_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1128 
Symbol 
ID4671707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1185485 
End bp1186690 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content65% 
IMG OID639838246 
Producthypothetical protein 
Protein accessionYP_985437 
Protein GI121593541 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.143546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.514398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCT ACTTCCTCGA CTGGGCCAAT CTGCTGCTGC GCTGGCTGCA CGTCATCACT 
GCCATCGCCT GGGTGGGCTC CTCCTTCTAC TTCGTCTTTC TGGACAGCAG CCTCACGCCG
CCGGTAGACG AGGACCTGAA GCGCCAGGGC GTGAACGGCG AGCTTTGGGC TGTGCACGGC
GGGGGCTTCT ACCACCCGGT CAAGTTCAAC ATGGCGCCCC CGAAGCTGCC GGACCATCTG
CACTGGTTCT TCTGGGAGAG CTACACCACC TGGCTCAGCG GCTTTGCGCT GCTTACGGTT
TCGTATCTGT GGAACGCGGG CATCTACCTG GTGCATCCGG CCGACCCGCT CATGTCGCCC
GCCATGGCCA TCGCGGCGGC ACTGGCCTTT CTGGTGGTGT TCTGGCTGCT GTACGACGGC
ATCTGCCGCG TGTTCGGCCA GAAGGCCAAC GGCGATGCCA TCGTGGGGGC GCTGGTGCTG
GTCCTGGTGT GCATCGCCGC GTGGCTGGCC TGCCGCATCT TTCCCGGCCA GGCGGCCTTC
CTGCTGATGG GCGCGATGCT CGCCACCTCG ATGAGCGCCA ACGTGTTCTT CTGGATCATT
CCCGGCCAGC GCAAGGTGGT GGCGGCACTG AAGGCCGGCC AGCCGGTGGA CCCGGTGCAT
GGCAAGCGCG GCAAGCAGCG CAGCGTGCAC AACACGTACT TCACGCTGCC TGTGCTGTTC
GCCATGCTCT CCAACCACTA CGGCTGGCTC TACAACCATG GGCAGAACTG GCTGGTACTG
ATCCTCATGA TGTTCGCAGG CGCGGCCATT CGCCAGTTCT TCGTGATGCG CCACGGCTAC
AAGCTGGGCC GCAACGGCCA TCCCTGGCCT TATGCGGCCG TCGGCGTGGT GGTGCTGCTG
GGCGTGGTGG TATGGCTCAA GCCGGCTGCG CCGGCCGTGT CCGCCGCCGC GCCGGCCGCC
GCAGGCTACG AACAACTGCA CGCCGTCATG CAAAAACACT GCGTGGTGTG CCACAGCGCC
AACACCGTCG CGCAGAAGAA CGTGAAGTTC GACACCCCGC AGGACGTGAA GAGCCACGCG
CAGCAGATCT ACCAACAGGT GGTGCAGCTG CGCAAGATGC CATTTGGCAA CCCGGGCGCA
CTGTCCGACG AAGAGCGCGA AACCTTCAAA CGCTGGTACG AGAACGGCGC CAGCATCGCG
CCCTGA
 
Protein sequence
MESYFLDWAN LLLRWLHVIT AIAWVGSSFY FVFLDSSLTP PVDEDLKRQG VNGELWAVHG 
GGFYHPVKFN MAPPKLPDHL HWFFWESYTT WLSGFALLTV SYLWNAGIYL VHPADPLMSP
AMAIAAALAF LVVFWLLYDG ICRVFGQKAN GDAIVGALVL VLVCIAAWLA CRIFPGQAAF
LLMGAMLATS MSANVFFWII PGQRKVVAAL KAGQPVDPVH GKRGKQRSVH NTYFTLPVLF
AMLSNHYGWL YNHGQNWLVL ILMMFAGAAI RQFFVMRHGY KLGRNGHPWP YAAVGVVVLL
GVVVWLKPAA PAVSAAAPAA AGYEQLHAVM QKHCVVCHSA NTVAQKNVKF DTPQDVKSHA
QQIYQQVVQL RKMPFGNPGA LSDEERETFK RWYENGASIA P