Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1127 |
Symbol | |
ID | 4671682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1184499 |
End bp | 1185296 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639838245 |
Product | GntR family transcriptional regulator |
Protein accession | YP_985436 |
Protein GI | 121593540 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.345812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGAAGTG TGTGGACAGA GGGAGAGGCG GGCACGGCCG TGAAGGCGTG CCATTTGAAA TATTGGAACA CTAATATATT AGTGCACGAA TGCGAGAATC CACGTATGCC CATACTGACC AAGTTCCGCC TTGACCGTTC GCGCCTGGCC GCCCCGCAGG TCTTCGAAAG CCTGCGCGAG GCCATTCTGA CGCTGGAGCT GGTGCCCGGC GCGATGCTGG TGCGCAGCGA CCTGGCCGGG CAATTCGGCG TGAGCCAGAC GCCCATCCGC GAGGCGCTGC TGCGCCTGGA AGAGGAGGGT CTGGTGGAAG TCTTTCCCCA GCACGCCACG CTGGTCAGCC GCATCGACGT GGCGGCCGCG CGTGAAGCGC ACTTCCTGCG CCGCTCCATC GAGCTGGAGA TCGTGCGCAC GCTGGCGCTG CAGCCGCCCC CCGGCCTGGT GGTGCAATTG CAGGCGCAGT GCGCACTGCA GGAATCGCTG GCGGCCGCGC AGCGTTATGA CGACTTTCTG GGGGCGGACC ATGGCTTTCA CCGCCTGATG TATGAGGCGG CCGGCGTCAT GGGCCTGTGG GCGTTGGTGC GCCGCTACTC CGGCCATGTG GATCGCCTGC GCCGCCTGCA CCTGCCCACT GCAGGCAAGA CGGGCGTCAT CATGCGCCAG CACCGGGCCA TCCTCGACGC CATTGACCGG CAGAACGCTC CCGCGGCCCA GGAGGCGTTG CGCGAGCACC TGTCGGGCAC GCTCAGCGCG GTGGACGATG TATGCGCCCA GCATCCGGAT TACATCCTGC AGGGTTAG
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Protein sequence | MGSVWTEGEA GTAVKACHLK YWNTNILVHE CENPRMPILT KFRLDRSRLA APQVFESLRE AILTLELVPG AMLVRSDLAG QFGVSQTPIR EALLRLEEEG LVEVFPQHAT LVSRIDVAAA REAHFLRRSI ELEIVRTLAL QPPPGLVVQL QAQCALQESL AAAQRYDDFL GADHGFHRLM YEAAGVMGLW ALVRRYSGHV DRLRRLHLPT AGKTGVIMRQ HRAILDAIDR QNAPAAQEAL REHLSGTLSA VDDVCAQHPD YILQG
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