Gene Ajs_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1127 
Symbol 
ID4671682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1184499 
End bp1185296 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content66% 
IMG OID639838245 
ProductGntR family transcriptional regulator 
Protein accessionYP_985436 
Protein GI121593540 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.345812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGAAGTG TGTGGACAGA GGGAGAGGCG GGCACGGCCG TGAAGGCGTG CCATTTGAAA 
TATTGGAACA CTAATATATT AGTGCACGAA TGCGAGAATC CACGTATGCC CATACTGACC
AAGTTCCGCC TTGACCGTTC GCGCCTGGCC GCCCCGCAGG TCTTCGAAAG CCTGCGCGAG
GCCATTCTGA CGCTGGAGCT GGTGCCCGGC GCGATGCTGG TGCGCAGCGA CCTGGCCGGG
CAATTCGGCG TGAGCCAGAC GCCCATCCGC GAGGCGCTGC TGCGCCTGGA AGAGGAGGGT
CTGGTGGAAG TCTTTCCCCA GCACGCCACG CTGGTCAGCC GCATCGACGT GGCGGCCGCG
CGTGAAGCGC ACTTCCTGCG CCGCTCCATC GAGCTGGAGA TCGTGCGCAC GCTGGCGCTG
CAGCCGCCCC CCGGCCTGGT GGTGCAATTG CAGGCGCAGT GCGCACTGCA GGAATCGCTG
GCGGCCGCGC AGCGTTATGA CGACTTTCTG GGGGCGGACC ATGGCTTTCA CCGCCTGATG
TATGAGGCGG CCGGCGTCAT GGGCCTGTGG GCGTTGGTGC GCCGCTACTC CGGCCATGTG
GATCGCCTGC GCCGCCTGCA CCTGCCCACT GCAGGCAAGA CGGGCGTCAT CATGCGCCAG
CACCGGGCCA TCCTCGACGC CATTGACCGG CAGAACGCTC CCGCGGCCCA GGAGGCGTTG
CGCGAGCACC TGTCGGGCAC GCTCAGCGCG GTGGACGATG TATGCGCCCA GCATCCGGAT
TACATCCTGC AGGGTTAG
 
Protein sequence
MGSVWTEGEA GTAVKACHLK YWNTNILVHE CENPRMPILT KFRLDRSRLA APQVFESLRE 
AILTLELVPG AMLVRSDLAG QFGVSQTPIR EALLRLEEEG LVEVFPQHAT LVSRIDVAAA
REAHFLRRSI ELEIVRTLAL QPPPGLVVQL QAQCALQESL AAAQRYDDFL GADHGFHRLM
YEAAGVMGLW ALVRRYSGHV DRLRRLHLPT AGKTGVIMRQ HRAILDAIDR QNAPAAQEAL
REHLSGTLSA VDDVCAQHPD YILQG