Gene Ajs_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1121 
Symbol 
ID4671202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1178289 
End bp1179266 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content67% 
IMG OID639838239 
Producthypothetical protein 
Protein accessionYP_985430 
Protein GI121593534 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.237862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.618143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAACC TTCGCAAACG CGCCCTGCTG GGTGCTTTGG CCGCCGCCGC GGCGCTCGCG 
TTGCCCGGCG CCTGGGCCCA GACCTGGCCC AGCCGCAGCG TGAGCATCAT CGTGCCGTTC
CCCGCGGGCG GAACGACCGA CGTGCTGGCA CGGGCGCTGG GGCAGGAGCT CTCCAAAACC
CTAGGCCAGC CCGTGGTGGT GGAGAACAAG CCCGGCGCCG GCGCCACGCT GGGCGCTGAC
TATGTGGCCA AGGCCAAGGC GGACGGCTAC ACGCTGCTCA TGGGTGCTGT GCACCACACC
ATCGCCACCA GCGTGTACCG CAAGCTGGGC TACGACTTTG AAAAGGACTT CGCTCCCATC
ACTACCGTGG CCCTGGTGCC CAATGTGCTG GTGGTGAATC CGCAGGTACC TGCCAAGACG
GTGCAGGAAC TGCTGGCACA GGCCAAGGCG CAGCCCGGCA AGCTCACCTA CGGCTCTAAC
GGCACAGGCA CGGGACAACA CCTGATCGGC GCGCAATTCG AAGGCATGGG CGGCGTGCAG
CTGCTGCACG TGCCCTACAA GGGCAGCGGC CCGCTGACCA CCGACCTGCT GGGCGGGCAG
ATCAGCATGT CGTTCGACAC CGTCACGCCG GTGCTGCCGC ACATCAAGGC CGGCAAGCTG
CGCGCGCTGG CCGTGACCAC GGCCAAGCGC TCGGTGGCAC TGCCCGACGT GCCCACGCTG
GAGGAGGCGG GCCTCCCGGG CTTCGACATG GGGACGTGGT TCGGCATGCT GGCGCCAGCG
GGCACGCCCA AGGACATCGT GGCGCGGCTG AACGCCGACA TGGTGAAGAT CATCCAGTCG
CCCGAGTTCC GTAAGAAGAT GGACGACATC GGCGCAGATC CCATCGCCAA CACGCCCGAG
CAGATGGCGC GTCAGATCAA GGACGATACG GCGCGCTTTG CGCGACTGGT CAAGGAAGCC
AAGGTTTCGC TGGATTGA
 
Protein sequence
MRNLRKRALL GALAAAAALA LPGAWAQTWP SRSVSIIVPF PAGGTTDVLA RALGQELSKT 
LGQPVVVENK PGAGATLGAD YVAKAKADGY TLLMGAVHHT IATSVYRKLG YDFEKDFAPI
TTVALVPNVL VVNPQVPAKT VQELLAQAKA QPGKLTYGSN GTGTGQHLIG AQFEGMGGVQ
LLHVPYKGSG PLTTDLLGGQ ISMSFDTVTP VLPHIKAGKL RALAVTTAKR SVALPDVPTL
EEAGLPGFDM GTWFGMLAPA GTPKDIVARL NADMVKIIQS PEFRKKMDDI GADPIANTPE
QMARQIKDDT ARFARLVKEA KVSLD