| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1120 |
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| Symbol | |
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| ID | 4671205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1177132 |
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| End bp | 1178229 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639838238 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_985429 |
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| Protein GI | 121593533 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.656227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.47844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA CCTATCGCAT TGCCTGCATC CCCGGCGACG GCATCGGCAA GGAGGTGATC
CCCGCCGGCC AGGCCGTGCT GGAGGCATTA GCGGCATCCC AGCCGGGCCT GGGCTTTGCG
TTCACCAGCT ATGGGTGGGG CGGAGACTGG TATCGCGCGC ACGGCGAGAT GATGCCGGCC
GACGGCCTGC AGGCGCTCAG GGACAAGGAC GCCATCCTGT TCGGCTCGGC CGGCGACCCG
CATATCCCCG ATCACATCAC GCTGTGGGGC TTGCGCCTGA AGATCTGCCA GGGGTTCGAC
CAGTACGCCA ACGTGCGCCC CACCCGCATC CTGCCGGGCA TCGATGCGCC GCTCAAGCGT
TGCGCGCCCC AGGACCTGGA CTGGGTCATC GTGCGTGAAA ACTCCGAAGG CGAATACGCC
GGCGTGGGCG GCCGTGTGCA CCAGGGCCAT CCGCTGGAGG CCGCGACCGA CGTGAGCATG
ATGACCCGCG CCGGTGTGGA GCGCATCATG CGCTTTGCGT TCAAACTGGC GCAGTCGCGT
CCGCGTAAGC TGCTCACGGT GGTCACCAAG AGCAACGCCC AGCGCCACGC CATGGTGATG
TGGGACGAAA TCGCGGTGCA GATCAGCCGC GAATTTCCCG ATGTGCGGTG GGATAAGGAA
CTGGTGGACG CGGCCACCGC GCGCATGGTG AACCGCCCCG CATCGCTGGA CACCATCGTC
GCCACCAACC TGCATGCCGA CATCCTGAGC GACCTGGCCG CCGCGCTGGC GGGCAGCCTG
GGGATAGCGC CCACCGGCAA CATCGATCCC GAGCGCCGCT ACCCCAGTAT GTTTGAGCCC
ATCCACGGCT CGGCCTTCGA CATCATGGGC AAGGGCCTGG CCAACCCGGT GGGCACGTTC
TGGAGCTGCG TGATGCTGCT AGAGCACCTG GGCGAACACG CCGCCGCGCA GCGCCTGATG
CGTGCCGTGG AGCATGTCAC CGCCAACCCT GCGCTGCACA CGGGCGACCT GGGCGGCCAG
GCCACCACGC AGCAGGTCAC CGATGCGGTG TGCGCCCAAC TGGCGCAGCC GGTGGGACAG
CAGGCAGCGC TGGCCTGA
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| Protein sequence | MSKTYRIACI PGDGIGKEVI PAGQAVLEAL AASQPGLGFA FTSYGWGGDW YRAHGEMMPA
DGLQALRDKD AILFGSAGDP HIPDHITLWG LRLKICQGFD QYANVRPTRI LPGIDAPLKR
CAPQDLDWVI VRENSEGEYA GVGGRVHQGH PLEAATDVSM MTRAGVERIM RFAFKLAQSR
PRKLLTVVTK SNAQRHAMVM WDEIAVQISR EFPDVRWDKE LVDAATARMV NRPASLDTIV
ATNLHADILS DLAAALAGSL GIAPTGNIDP ERRYPSMFEP IHGSAFDIMG KGLANPVGTF
WSCVMLLEHL GEHAAAQRLM RAVEHVTANP ALHTGDLGGQ ATTQQVTDAV CAQLAQPVGQ
QAALA
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