| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1109 |
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| Symbol | |
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| ID | 4671258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1162521 |
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| End bp | 1163756 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639838227 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_985418 |
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| Protein GI | 121593522 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTGT CTGCCACGCC CACTTCCAGC ACCGCCACAC CCCCCGCCGG TGCCGATGCC
GCCAGCCCCG CGGACGAGCG CACGCTGGTG CGCGCCGTGC TGGCCATGGG CGTGGGAGGC
TTTGCCATCG GCACCGGCGA ATTCGTCATC ATGGGCCTGC TGCCTGAGGT GGCGCTTGAC
CTGGGCGTGA GCATTCCGCA GGCCGGGCAC GTGATCAGCG CCTACGCGCT GGGCGTGGTG
GTGGGCGCGC CGGTGCTGGC CGTGGCGGCG GCGCACTGGG GCCGGCGGGC GCTGCTCATG
GCGCTGATGG CGGTCTACGC CCTGGGCAAC TTTGCGTCGG CGCTGGCGCC AGGCTATGCG
TCGCTGGGGC TGCTGCGGCT GGTCAGCGGC CTGCCGCACG GCACCTACTT CGGCGTCGCG
GCGCTGGTGG CCGCGGCACT GTCACGGCCG GGCCAGCGCG CCCGGGCCGT GGGCTGGGTG
ATGCTGGGGC TGACCAGCGC GACGCTGGTG GGTGTGCCCA TCGCGGCGGC GCTGGGCAAT
CTGCTGGGCT GGCGCGCGGC CTTCGTGTTT GTGGGGGCCA TCGCGCTGGC GGCGGTGTTC
ATGGTGCGGC GCTGGGTGCC CGACATGCCC GCGCCGCAGG GCGCCAGCCC CTGGCGCGAA
CTGGGCGCGC TGGCGCGGGG CCAGGTGTGG TTCACGCTGG GCATCGGCGC CATCGGCTTC
GGCGGCATGT TCGCGGTGTT CAGCTACATC AAGCCCACGC TACTGGAAGT GGCCGGCATG
CCGGCGGCGC TGGTGCCGTT CACGCTGTCG CTGTTTGGCC TGGGCATGGT GGCGGGCAAC
CTGGTGGGCT CGCGCATGGC GGACCGCGCA CTGATGCCCA CCGTGGGCAA GCTGCTGTGG
TGGTCGGTGG CGGTGATGGT GGTGTTCGTC GCGGCGGCGC ACCACCCGCT GACGGCGGCG
CTGTCCGTCT TCCTGCTGGG TACGGTGGTG GCCATCGGTC CCGCGCTGCA GATCCGTCTG
ATGGACGTGG CGGGCGATGC GCAGACGCTG GCGGCCGCGC TCAACCATTC GGCCTTCAAC
GTTGCGAATG CGCTGGGGGC CTGGCTGGGC GGTGTGGCCA TCGCAGCGGG CGGCGGCTGG
ACTTCCACCG GCTGGGTGGG GGCGCTGCTG GGCCTGGGCG GCCTGGCTGT GTTCACAGCG
GCGCTGGCCA GCGAGCGGCG GACACGGGCT CGCTGA
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| Protein sequence | MTVSATPTSS TATPPAGADA ASPADERTLV RAVLAMGVGG FAIGTGEFVI MGLLPEVALD
LGVSIPQAGH VISAYALGVV VGAPVLAVAA AHWGRRALLM ALMAVYALGN FASALAPGYA
SLGLLRLVSG LPHGTYFGVA ALVAAALSRP GQRARAVGWV MLGLTSATLV GVPIAAALGN
LLGWRAAFVF VGAIALAAVF MVRRWVPDMP APQGASPWRE LGALARGQVW FTLGIGAIGF
GGMFAVFSYI KPTLLEVAGM PAALVPFTLS LFGLGMVAGN LVGSRMADRA LMPTVGKLLW
WSVAVMVVFV AAAHHPLTAA LSVFLLGTVV AIGPALQIRL MDVAGDAQTL AAALNHSAFN
VANALGAWLG GVAIAAGGGW TSTGWVGALL GLGGLAVFTA ALASERRTRA R
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