| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1096 |
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| Symbol | |
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| ID | 4671538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1149951 |
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| End bp | 1151831 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639838215 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_985407 |
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| Protein GI | 121593511 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAACA CCCGTCCGTT CAATGTGCGC TTGAGTGCGC TTTCCGTGCA CGCGCGCGTC
GCCGTGCTGC CGCTGGCGCT GGCCGCCGCT TTCCCCGCCG TGTCCCAGAC CCTGCTGGCC
CAGGCAGCCA CAGAACCCCA ACTGCGTGAA ACCGTCATCA CGGCAACCCG CGTGGCCCGG
CCGCTGGCCG ACATCGTGTC CGATGTGTCC GTCATCGACC GTGAAACCAT CGAGGCCAGC
GGCGCGGTAG GCGTCATTGA CGTGATCTCG CGCCTGCCAG GCGTGCAGAT CACGCGCAAT
GGCGGCCAGG GCAGCAATGG CAGCGTCTAC CTGCGCGGCG CGGAGTCGCG TTTTACCGCC
GTGTACCTGG ACGGCGTGCG CCTGGACTCG CAATCCACCG GCGGCGTGGT GTGGGAGCAA
ATCCCGTTGT CGCAGATCGA CCGCATCGAG GTCGTGCGCG GGCCAGCGGC TGCTGTGTAC
GGCTCGGATG CCATGGGAGG CGTGATCCAG CTCTTCACCA AAAAGGGCGA GGGTGCGCCG
GCGCCCTACG TGGGCGTGGG CATGGGCAAC CAGGGCACGC GGACGGTGCA GGCCGGCGTG
AGTGGCGGCA CCGAGCAGGT GGACTATGCG CTGGGGCTGT CGCATGAGCG CGCCGATGGC
TTCAGTGCCC GCGTAGGCTC CGCCTACAAC CCGGACAAAG ACGGCTACCG CCGCACCTCT
GCCAATGCCC GACTGGGCGT GCAGTTCGAC ACGACCCATC GCCTGGAGGG CACGCTGCTG
GCCAGCAACC TCAACTCGCA GTACGACGGC AGCAAAACGG CCGACGACCG CAATCACCAC
CAGTTGCGCA CGGCCAGCCT GGCATGGCTG GCCAAGTGGA GCGACGTGTA CAGCACGCGC
TTGCAGGTCA CGCAGGGGCA GAGTGAATAC AGCACCCGGC CCAACTTCTA CATGACCGAG
ACCACGCTGC ACAATTACCT GCTGCAAAAC GAGTGGCGCC TGGGCGCGCA TCTGTTCACA
GCCGCGCTGG AGCGCCGCGA GGACGAACTG CACAACCCCG CCACCGAGTT CGTGGGCGAC
CTCCAGCGTG ACCGCTCACA GAACGCGCTC GCGCTGGGCT ATGGCCTGAA CCAGGGCGCC
CATACGCTGC AGGCCAACCT GCGCTATGAC GACGACAGCG AGTTCGGCGG CAAAAGCACG
GGCAGCCTGT CCTATGGCTA CGCCATTACG CCGCAGTGGC GCGTCACCGC AGCGGCCGGC
ACGTCCTTCC GCGCACCCAC GCTCTACCAC CGCTTCAGCG AATACGGCGC GCCCGACCTG
CAGCCCGAGA AGGGGCGCAA CGTGGAACTG GGCGCGCGGT GGACGCAAGG AGAGAGCAGC
GTGGGTGTCG TGGCGTACCG CAACCGCGTC AGCAACCTCA TCAATTTCGG CGCCGCGGGC
CGCTGTGATT CCAGCTTCGG CTGCTACGAG AACGTGGGGC GCGCCGAGTA CAAGGGCGTG
ACGCTGTCGG CCGCGCACCG CATCGCGGGC GTGTCGCTGC ATGGCTCCAT CGACTGGCAG
AACCCGCGTG ACCTGGACAG CGGCAAACTG CTGGCGCGCC GTGCCAAGCG CTACGCCACG
CTGGGTGCCG ACACCCTGGT GGCAGGCTGG ACGCTGGGGG CAGAGCTCTA CGCATCCGCG
CGCCGGTACG ACAACGCGGC CAACACCAAC GTACTGGGCG GCTACACCAC GCTCAACCTC
TACACCAGCA AGCGCGTGGC GCGCGACGTG ACGCTGCTGG CCCGCGTCGA CAACCTGGCC
GACAAGGACT ACCAGTTGGC GCGCACCTAC GCCACCGGCG GCCGCACATT CTATGTGGGC
CTGAAGTGGG CGCCGCAGTA A
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| Protein sequence | MTNTRPFNVR LSALSVHARV AVLPLALAAA FPAVSQTLLA QAATEPQLRE TVITATRVAR
PLADIVSDVS VIDRETIEAS GAVGVIDVIS RLPGVQITRN GGQGSNGSVY LRGAESRFTA
VYLDGVRLDS QSTGGVVWEQ IPLSQIDRIE VVRGPAAAVY GSDAMGGVIQ LFTKKGEGAP
APYVGVGMGN QGTRTVQAGV SGGTEQVDYA LGLSHERADG FSARVGSAYN PDKDGYRRTS
ANARLGVQFD TTHRLEGTLL ASNLNSQYDG SKTADDRNHH QLRTASLAWL AKWSDVYSTR
LQVTQGQSEY STRPNFYMTE TTLHNYLLQN EWRLGAHLFT AALERREDEL HNPATEFVGD
LQRDRSQNAL ALGYGLNQGA HTLQANLRYD DDSEFGGKST GSLSYGYAIT PQWRVTAAAG
TSFRAPTLYH RFSEYGAPDL QPEKGRNVEL GARWTQGESS VGVVAYRNRV SNLINFGAAG
RCDSSFGCYE NVGRAEYKGV TLSAAHRIAG VSLHGSIDWQ NPRDLDSGKL LARRAKRYAT
LGADTLVAGW TLGAELYASA RRYDNAANTN VLGGYTTLNL YTSKRVARDV TLLARVDNLA
DKDYQLARTY ATGGRTFYVG LKWAPQ
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