| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1085 |
|---|
| Symbol | |
|---|
| ID | 4674206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1141353 |
|---|
| End bp | 1141985 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639838204 |
|---|
| Product | cbb3-type cytochrome c oxidase subunit II |
|---|
| Protein accession | YP_985396 |
|---|
| Protein GI | 121593500 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
|---|
| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.318856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATA CGCATAACAA AGCATCCACC GGCTTCACGC ACGAGAAGGT CGAAACCAGC
AACTTCCTGA TGATCGTGCT GATCTTGCTG GTTGTGGCCG TCGGCGGCCT GGTGGAAATC
GTTCCTCTGT TCTTTCAAAA ATCGACGACT GAGGCCGTTC AAGGCGTGAA GCCTTACACG
GCAGTGCAAT TGATCGGACG CGATATCTAC CTGCGCGAGG GTTGCTACAA CTGCCACTCG
CAGATGATCC GTCCGTTCCG CGCGGAAACC CTGCGTTATG GTCACTACTC GGTGGCTGGC
GAGTTCGTCT ACGACCATCC CTTCCAATGG GGTAGCAAGC GCACTGGGCC CGACCTGCAT
CGCGTGGGTG GAAAGTACAG CGATGAATGG CATCGCATTC ACCTGAACAA TCCGCGCGAC
GTGGTGCCCG AATCCAATAT GCCCGCCTAC CCCTGGCTGG AAAAGAACCA GATCGATCCT
TCCGTTGTCG CTCCTCGCAT GAAGGCATTG CGCACGGTCG GCGTCCCGTA TACGGATGAG
GAGATCGCCA GCGCCGCCGA GCAGGTCAAG GGCAAGACAG AGATGGATGC CGTGGTGGCC
TATCTGCAGG TTTTGGGCCG TGCGCTCAAG TAA
|
|---|
| Protein sequence | MSNTHNKAST GFTHEKVETS NFLMIVLILL VVAVGGLVEI VPLFFQKSTT EAVQGVKPYT
AVQLIGRDIY LREGCYNCHS QMIRPFRAET LRYGHYSVAG EFVYDHPFQW GSKRTGPDLH
RVGGKYSDEW HRIHLNNPRD VVPESNMPAY PWLEKNQIDP SVVAPRMKAL RTVGVPYTDE
EIASAAEQVK GKTEMDAVVA YLQVLGRALK
|
|---|
| |