Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1081 |
Symbol | |
ID | 4671178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1136732 |
End bp | 1137175 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639838200 |
Product | UspA domain-containing protein |
Protein accession | YP_985392 |
Protein GI | 121593496 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0952859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAAAC GCATCCTGAT AGCCACCGAC GGTTCCCCCT TGTCGCAAAA GGCCGTGGAA AGCGGGCTCT CGCTGGCGGG GCTCACAGGT GCATCGGTGG TCGCCTTGAA GGTCGTTCCC CGGTATCCGC GCAGCTATTT CGAAGGTGGC CTGCCCGTGG ACGCCGCGGA CATCAAGCGC ATCGAGAAGC AGTGGGCGGA TGCGGCCCAG GAACTGGTGG ACAAGGTCAA GGTGCAGGGC ACCGACGAAG GCGTAACCGT GAAGACCGTG GTCGCCAAGT CCGACCTGAT CGCCGAAGCC GTGATCGCCG CCGCCAAGAA GCACAAGTGC GACCTGATCG TGATGGCCTC GCACGGCCGC AAGGGCATCA AGCGCCTGCT GCTGGGCAGC GAAACGCAGC ACGTGCTGAC GCACTCGCAC ATTCCGGTGC TGGTGCTGCG CTAA
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Protein sequence | MYKRILIATD GSPLSQKAVE SGLSLAGLTG ASVVALKVVP RYPRSYFEGG LPVDAADIKR IEKQWADAAQ ELVDKVKVQG TDEGVTVKTV VAKSDLIAEA VIAAAKKHKC DLIVMASHGR KGIKRLLLGS ETQHVLTHSH IPVLVLR
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