| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1076 |
|---|
| Symbol | |
|---|
| ID | 4671098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1130841 |
|---|
| End bp | 1131512 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639838195 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_985387 |
|---|
| Protein GI | 121593491 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGTC CGCCCGCCAA TTCCCTGCAC CACCAGGCCG CCGAGATGCT GCGTCAGCAG
ATCTTTGCGG GCGAACTGGC GCCGGGCAGC TTCGTGGACG AGGCCGCGCT GTGCGAGCGG
CTGGCCGTGT CGCGTACGCC GCTGCGCGAG GCGCTCAAGG TGCTGGTGGC GGAAGGGCTG
CTGCGCCATG AGCCGCGCCG CGGCTGCTTC GTGGCCGAGA TCACGGAGCG CGATCTGCAG
GAGATCTTCC CCGTGATCGC GCTGCTGGAG GGCCGTGCGG CCTATGAGGC CACCGAGCAC
GCAGGCCCCG CCGACATCGA CGCGCTGCAG GTGCTGCACC AGCGCCTGCA GGACCATGCC
GAGGCGGGGC GCATCACCGA ATACTACGAA GCCAACTACG CCATCCACGA GGCCTTCATC
ACCCTGGCGG ACAACCGCTG GCTGGCCCAG GTGATCGGCG ACCTGCGCAA GATCCTGCGC
CTGGCGCGGC ACCAGACGTT GCAGGTGCCC GGCCGGCTGC AGCAGAGCCT GTCGGAGCAT
CGGCAGGTGT TCGCCGCACT CCAAAAGGGC GACGCCGCCG CGGCTGAGCA GGCCATGCGC
AACCACCTTC TGGCGCAGCG CGACGCGCTG CGCGAGCTTG CACGCAACCA CCCCTCACGG
ATCACACCAT GA
|
|---|
| Protein sequence | MRRPPANSLH HQAAEMLRQQ IFAGELAPGS FVDEAALCER LAVSRTPLRE ALKVLVAEGL
LRHEPRRGCF VAEITERDLQ EIFPVIALLE GRAAYEATEH AGPADIDALQ VLHQRLQDHA
EAGRITEYYE ANYAIHEAFI TLADNRWLAQ VIGDLRKILR LARHQTLQVP GRLQQSLSEH
RQVFAALQKG DAAAAEQAMR NHLLAQRDAL RELARNHPSR ITP
|
|---|
| |